Table 1.
GO ID | GO Term | Median p-value |
---|---|---|
Overrepresented categories: | ||
32991 | macromolecular complex | 4.96E-105 |
43234 | protein complex | 1.80E-78 |
44428 | nuclear part | 1.06E-66 |
5622 | intracellular | 2.74E-54 |
44424 | intracellular part | 3.72E-53 |
44422 | organelle part | 8.61E-51 |
44446 | intracellular organelle part | 8.61E-51 |
5634 | nucleus | 2.43E-52 |
43229 | intracellular organelle | 8.85E-48 |
43226 | organelle | 8.85E-48 |
31981 | nuclear lumen | 1.27E-53 |
44451 | nucleoplasm part | 5.98E-38 |
5654 | nucleoplasm | 1.75E-38 |
44464 | cell part | 3.54E-33 |
5623 | cell | 4.46E-33 |
43228 | non-membrane-bounded organelle | 1.67E-34 |
43232 | intracellular non-membrane-bounded organelle | 1.67E-34 |
43233 | organelle lumen | 1.02E-31 |
31974 | membrane-enclosed lumen | 1.02E-31 |
43231 | intracellular membrane-bounded organelle | 4.99E-31 |
43227 | membrane-bounded organelle | 4.99E-31 |
16591 | DNA-directed RNA polymerase II, holoenzyme | 4.98E-11 |
5694 | chromosome | 7.67E-15 |
30529 | ribonucleoprotein complex | 2.76E-12 |
5730 | nucleolus | 6.52E-13 |
502 | proteasome complex | 2.37E-06 |
44427 | chromosomal part | 1.61E-14 |
5856 | cytoskeleton | 3.25E-07 |
5679 | chromatin remodeling complex | 1.70E-09 |
123 | histone acetyltransferase complex | 5.87E-10 |
44430 | cytoskeletal part | 1.65E-05 |
22624 | proteasome accessory complex | 9.47E-04 |
5838 | proteasome regulatory particle | 9.47E-04 |
44452 | nucleolar part | 2.30E-08 |
5669 | transcription factor TFIID complex | 7.26E-03 |
5681 | spliceosome | 4.85E-04 |
119 | mediator complex | 3.91E-04 |
124 | SAGA complex | 1.04E-05 |
5667 | transcription factor complex | 3.06E-04 |
812 | SWR1 complex | 1.15E-03 |
44453 | nuclear membrane part | 6.00E-03 |
Underrepresented categories: | ||
943 | retrotransposon nucleocapsid | 2.88E-05 |
31224 | intrinsic to membrane | 1.22E-05 |
44429 | mitochondrial part | 3.18E-04 |
5740 | mitochondrial envelope | 4.89E-03 |
16021 | integral to membrane | 7.67E-05 |
44425 | membrane part | 1.85E-03 |
5743 | mitochondrial inner membrane | 7.18E-03 |
5739 | mitochondrion | 6.34E-03 |
The median p-values were calculated after sampling 10 random sets of 1000 interactions from BIOGRID. P-values are shown after Bonferroni's correction for multiple hypotheses.