Table 3. Protein solubility data.
DMFS Default | DMFS Tuned | Enumerative | Reported | ||||
SVM | 0.62 | SVM | 0.63 | SVM () | 0.63 | 1-mer (SVM) | 0.644 |
RF | 0.61 | RF | 0.645 | RF () | 0.64 | 2-mer (SVM) | 0.597 |
3-mer (SVM) | 0.548 |
Protein solubility data accuracies for default and tuned parameters settings, as well as for reported and eumerative methods. Reported values are from Magnan et al. [5]. The DMFS pipeline results are stable with small standard deviations as determined by 20 runs with random data partitioning: (a) default parameter settings: 0.006 (SVM) and 0.0048 (RF), and (b) tuned parameter settings: 0.0052 (SVM) and 0.0049 (RF).