Table 5.
BLAST Substitution Matrices and Gap Costs used for BLASTP searches in this paper.
| Query Length | Substitution Matrix | Gap Costs |
|---|---|---|
| <35 | PAM-30 | (9,1) |
| 35-50 | PAM-70 | (10,1) |
| 50-85 | BLOSUM-80 | (10,1) |
| 85 | BLOSUM-62 | (10,1) |
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