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. 2011 Nov 11;6(11):e27342. doi: 10.1371/journal.pone.0027342

Table 1. HET-s homologs showing significant structural homology to the 2RNM solenoid.

Threading Score Accession Numbera Protein DBb Structural Model
Template Chain % Identityc RMSDd Prochecke
LOW [GI: 242774612] Hypothetical protein, Talaromyces stipitatus, TSTA_087480 NR C 17.7 0.816 88.1
LOW EEU47148.1 Hypothetical protein, Nectria haematococca mpVI 77-13-4 BROAD A 36.7 0.616 84.7
LOW EEU42351.1 Hypothetical protein, Nectria haematococca mpVI 77-13-4 BROAD C 31.6 0.736 82.8
LOW EEU39630 Hypothetical protein, Nectria haematococca mpVI 77-13-4 BROAD C 24.1 1.048 82.3
MEDIUM EEU38121.1 Hypothetical protein, Nectria haematococca mpVI 77-13-4 BROAD A 35.4 0.487 77.6
LOW FOXG14669 Conserved hypothetical protein, Fusarium oxysporum BROAD C 34.2 1.460 81.8
LOW FOXG17103 or FOXG17314 Conserved hypothetical protein, Fusarium oxysporum BROAD C 29.1 1.073 80
LOW FVEG13490 Fusarium verticilliodes, hypothetical protein BROAD C 26.6 1.172 80.7
LOW FG 08145.1[GI: 46127535] Hypothetical protein, Fusarium graminearum NR D 31.6 0.667 75
MEDIUM FG 10600.1[GI: 46138171] Hypothetical protein, Fusarium graminearum NR A structure based on experimental analysis is proposed by Wasmer et al, 2010 [10]
LOW [GI: 320592582] Small s protein, Grosmannia clavigera kw1407 NR A 26.6 0.492 83.3

a : The Genbank (GI) identification number from NR and BROAD accession numbers are provided, where available.

b : NR: non-redundant database, BROAD: Broad Fungal Genomes Initiative.

c : Percentage identity based on comparison with template in pGenThreader.

d : RMSD calculations are performed against the NMR model 9 of the [PDB: 2RNM] template.

e : Represents percentage of residues in the most favored region.