Western blots for PrPres of representative brain extracts following SDS-PAGE using (A) 16.5% tris-glycine and (B-F) 4–20% tris-glycine gradient gels. Immunochemical detection was performed with antibodies P4, Sha31 or 9A2 as indicated. In some instances (D, E), samples were deglycosylated with PNGaseF. (F) Atypical scrapie PrPres banding pattern following sample pretreatment with different concentrations of proteinase K (PK, in µg/ml), compared to the PK digestion protocol of the Bio-Rad TeSeE confirmatory Western blot (BR). Identification codes for the atypical scrapie isolates are shown at the top. Controls: cl, classical scrapie affected tg338 mouse; non-inoc, non-inoculated tg 338 mouse; neg s, TSE negative sheep. Molecular mass standards in kDa and loaded tissue equivalents are indicated.