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. Author manuscript; available in PMC: 2012 Oct 28.
Published in final edited form as: J Nat Prod. 2011 Sep 14;74(10):2273–2277. doi: 10.1021/np2003066

Fig 1.

Fig 1

Docking of berkeleydione 1 (orange, up conformation in A, pink, down conformation in B), preaustinoid A 3 (purple, A), berkeleyone B 2 (green, B) into 1RWV, showing the top scoring pose across the discussed ensemble of caspase-1 structures. Atoms in the protein are colored according to atom type (oxygen, red; nitrogen, blue; sulfur, yellow), with polar hydrogens colored cyan. Arg383, which bisects the active site groove, is indicated. The catalytic pocket can be seen behind the ligands in A.