Table 2. Oligonucleotides used for XChIP-PCR.
Gene | Site | Primer | Tm(°C) | Size (bp) | Sequence (5' to 3') |
DNMT1 | 1 | DNMT1-A | 53 | 317 | F - GCTGAGGCATGAGAATCGCTTGAA |
R - GGAGGATCGCTTGAGGTTAGGAGTT | |||||
2 | DNMT1-B | 54 | 243 | F - AGGCTGGAATGTAGTGGTACAATCA | |
R - AGGGTGGGAGGATCGCTTGA | |||||
2 and 3 | DNMT1-C | 54 | 214 | F - GTGATCTTCCTGCCTCAACCTCTG | |
R - CGCCTGTCATCCCAGCACTTT | |||||
4 | DNMT1-D | 55 | 123 | F - CCAAAGTGCTGGGATGACAGG | |
R - GCTAGTACCAAGAATCTCACAGTGTA | |||||
5 | DNMT1-E | 53 | 400 | F - GAGGTTGGATTGGAACTGAGGACTT | |
R - CATCTCGGAGGCTTCAGCAGAC | |||||
DNMT3a | 1 | DNMT3a-A | 54 | 332 | F - AGGCTGGAATGTAGTGGTACAATCA |
R - AGGGTGGGAGGATCGCTTGA | |||||
2 and 3 | DNMT3a-B | 55 | 124 | F - CCACCACCAACTCCAGCAATC | |
R - CTACTCAGCACTTCAGCTATATCACA | |||||
4 | DNMT3a-C | 55 | 194 | F - GCCATGTCCTGTGCCAGTCA | |
R - CTCACTATGTGCTCATCTCACTCCT | |||||
5 | DNMT3a-D | 57 | 182 | F - TGAGTGGCTGTGCTGGTGGAA | |
R - TGAGGTGGGAGGTTGAATGAAATGAC | |||||
6 | DNMT3a-E | 54 | 100 | F - ATCTTTCAGTCTTCCAGTGCCCAAC | |
R - TCTCTGAGATGAGCTGCCTTGAAG |
Supplementary figure legends.