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. 2011 Nov 14;6(11):e27684. doi: 10.1371/journal.pone.0027684

Table 2. Oligonucleotides used for XChIP-PCR.

Gene Site Primer Tm(°C) Size (bp) Sequence (5' to 3')
DNMT1 1 DNMT1-A 53 317 F - GCTGAGGCATGAGAATCGCTTGAA
R - GGAGGATCGCTTGAGGTTAGGAGTT
2 DNMT1-B 54 243 F - AGGCTGGAATGTAGTGGTACAATCA
R - AGGGTGGGAGGATCGCTTGA
2 and 3 DNMT1-C 54 214 F - GTGATCTTCCTGCCTCAACCTCTG
R - CGCCTGTCATCCCAGCACTTT
4 DNMT1-D 55 123 F - CCAAAGTGCTGGGATGACAGG
R - GCTAGTACCAAGAATCTCACAGTGTA
5 DNMT1-E 53 400 F - GAGGTTGGATTGGAACTGAGGACTT
R - CATCTCGGAGGCTTCAGCAGAC
DNMT3a 1 DNMT3a-A 54 332 F - AGGCTGGAATGTAGTGGTACAATCA
R - AGGGTGGGAGGATCGCTTGA
2 and 3 DNMT3a-B 55 124 F - CCACCACCAACTCCAGCAATC
R - CTACTCAGCACTTCAGCTATATCACA
4 DNMT3a-C 55 194 F - GCCATGTCCTGTGCCAGTCA
R - CTCACTATGTGCTCATCTCACTCCT
5 DNMT3a-D 57 182 F - TGAGTGGCTGTGCTGGTGGAA
R - TGAGGTGGGAGGTTGAATGAAATGAC
6 DNMT3a-E 54 100 F - ATCTTTCAGTCTTCCAGTGCCCAAC
R - TCTCTGAGATGAGCTGCCTTGAAG

Supplementary figure legends.