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AUC values of AG-QP360 and AG-CTF on the artificial negative data sets
| Organism | Method | 1-mer | 2-mer | 3-mer |
|---|---|---|---|---|
| E. coli | AG-QP360 | 0.966 | 0.932 | 0.914 |
| AG-CTF | 0.957 | 0.936 | - | |
| S. cerevisiae | AG-QP360 | 0.969 | 0.931 | 0.918 |
| AG-CTF | 0.956 | 0.936 | - | |
-: The method has no power to discriminate positive PPIs from this type of negative PPIs.
