Table 8.
Proportions of differentially expressed or non-differentially expressed genes associated with INDELs are significantly different
| Tissue type | DE genes associated with INDELs/total DE genes (%) | Non-DE genes associated with INDELs/total non-DE genes (%) | Proportions test (P-value) |
|---|---|---|---|
| Brain | 2,266/2,266 + 4,618 (33%) | 2,153/2,153 + 5,096 (30%) | 4.054E-05 |
| Testis | 3,438/3,438 + 7,365 (32%) | 1,256/1,256 + 3,386 (27%) | 3.93E-09 |
| Heart | 2,233/2,233 + 4,610 (33%) | 1,948/1,948 + 4,706 (29%) | 2.7E-05 |
| Liver | 1,696/1,696 + 3,612 (32%) | 2,466/2,466 + 5,910 (29%) | 0.0019 |
| Kidney | 2,179/2,179 + 4,410 (33%) | 2,144/2,144 + 5,326 (29%) | 2.35E-08 |
DE = differentially expressed; INDEL = insertion and deletion; non-DE = non-differentially expressed. Proportions for all INDELs across all tissues are shown.