Table 2.
The sequences of oligonucleotide primers used for detection of mycoplasmas
Primers of species-specific mycoplasmas | Primer sequence | Tm | GC | Amplicon size |
---|---|---|---|---|
Universal primer | S: GTG GGG AGG AAA YAG GAT TAG A | 53–54.8 | 45–50 | 425 bp |
AS: GGC ATG ATG ATT TGA CGT CRT | 50.5–52.4 | 45–48 | ||
M. Arginini | S: TGA TCA TTA GTC GGT GGA GAG TTC | 55.7 | 46 | 326 bp |
AS: TAT CTC TAG AGT CCT CGA CAT GAC TC | 58 | 46 | ||
M. Orale | S: TGA TCA TTA GTC GGT GGA AAA CTA | 52.3 | 38 | 325 bp |
AS: TAT CTC TAG AGT CCT CGA CAT GAC TC | 58 | 46 | ||
M. Hyorhinis | S: CGA TGA TCA TTA GTT GGT GGA ATA AAT | 53.7 | 33 | 334 bp |
AS: AGG CAG TAT CTC TAG AGT CCT TAA CTT A | 57 | 39 | ||
M. Fermentans | S: TGA TCA TTA GCT GAT GGG GAA CT | 53.5 | 43 | 324 bp |
AS: TCT CTT AGA GTC CTC AAC TAA ATG | 52.3 | 38 | ||
M. Genitalium | S: ATA GAT ACT AGC TGT CGG AGC GAT | 55.7 | 46 | 335 bp |
AS: CCA ATT TAC ATT AGC AGT CTC GTT AA | 53.2 | 35 | ||
A. Laidlawii | S: GAT GAG AAC TAA GTG TTG GCC ATA A | 54.4 | 40 | 300 bp |
AS: CGC TAG AGT CCC CAA CTT AAT GA | 55.3 | 48 | ||
M. Hominis | S: ATC ATT AGT CGG TGG AGA ATC A | 55.1 | 41 | 301 bp |
AS: GCA GTA TCT CTA CTA GAG TCC TCA ACT TAAT | 59.1 | 39 | ||
M. Pirum | S: TGG ATG TTA GAT GTC GGG GTA AA | 53.5 | 43 | 324 bp |
AS: GTT GGC AGT ATC GCT AGA CAA A | 56.7 | 41 | ||
M. Pneumoniae | S: GAT ACT AGC TGT CGG GGC GAT | 56.3 | 57 | 329 bp |
AS: AAT TTG CAT TAG TAG CAG TCT CGC TAG | 56.7 | 41 | ||
M. Salivarium | S: GAT CAT TAG TCG GCA GAG AAC TCG | 57.4 | 50 | 324 bp |
AS: TAT CTC TAG AGT CCT CGA CAT GAC TC | 58 | 46 | ||
U. Urealyticum | S: CAT CAT TAA ATG TCG GCT CGA A | 51.1 | 41 | 323 bp |
AS: CGG TAG CAG TAT CGC TAG AAA AGC | 57.4 | 50 |