TABLE 2.
Virus | Quantity (PFU) | RT-PCRb | RT-LAMP
|
||
---|---|---|---|---|---|
Agarose gel analysis | Real-time monitoring of turbidity
|
||||
Tp (min) | Interpretationb | ||||
WN virus strain NY99 | 10,000 | Pos | Pos | 17 | Pos |
1,000 | Pos | Pos | 18 | Pos | |
100 | Pos | Pos | 19 | Pos | |
10 | Pos | Pos | 22 | Pos | |
1 | Pos | Pos | 25 | Pos | |
0.1 | Neg | Pos | 33 | Pos | |
0.01 | Neg | Neg | NA | Neg | |
0.001 | Neg | Neg | NA | Neg | |
0.0001 | Neg | Neg | NA | Neg | |
0 | Neg | Neg | NA | Neg | |
WN virus strain Eg101 | 1 | Pos | Pos | 28 | Pos |
0.1 | Neg | Pos | 37 | Pos | |
0.01 | Neg | Neg | NA | Neg | |
JE virus | 100,000 | Neg | Neg | NA | Neg |
DEN-2 | 100,000 | Neg | Neg | NA | Neg |
SLE virus | ND | Neg | Neg | NA | Neg |
Pos, positive; Neg, negative; NA, turbidity did not appear; ND, not determined.
Positive result by RT-PCR revealed 201-bp amplicon on 3% agarose gel analysis.
Tp of ≤60 min is interpreted as positive by the real-time RT-LAMP method.