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. 2004 Jan;42(1):257–263. doi: 10.1128/JCM.42.1.257-263.2004

TABLE 2.

Comparative sensitivities and specificities of the RT-LAMP and RT-PCR assay systems for detection of WN virusa

Virus Quantity (PFU) RT-PCRb RT-LAMP
Agarose gel analysis Real-time monitoring of turbidity
Tp (min) Interpretationb
WN virus strain NY99 10,000 Pos Pos 17 Pos
1,000 Pos Pos 18 Pos
100 Pos Pos 19 Pos
10 Pos Pos 22 Pos
1 Pos Pos 25 Pos
0.1 Neg Pos 33 Pos
0.01 Neg Neg NA Neg
0.001 Neg Neg NA Neg
0.0001 Neg Neg NA Neg
0 Neg Neg NA Neg
WN virus strain Eg101 1 Pos Pos 28 Pos
0.1 Neg Pos 37 Pos
0.01 Neg Neg NA Neg
JE virus 100,000 Neg Neg NA Neg
DEN-2 100,000 Neg Neg NA Neg
SLE virus ND Neg Neg NA Neg
a

Pos, positive; Neg, negative; NA, turbidity did not appear; ND, not determined.

b

Positive result by RT-PCR revealed 201-bp amplicon on 3% agarose gel analysis.

c

Tp of ≤60 min is interpreted as positive by the real-time RT-LAMP method.