Table 2.
Early gene expression changes in stressed LCLs
| Gene | LCL-6, 3 h | LCL3, 3 h | Average | Refseq transcript ID |
|---|---|---|---|---|
| Early activation (3 h only) | ||||
| EGR3 | 6.7 | 6.4 | 6.6 | NM_004430 |
| MYADM | 5.6 | 4.7 | 5.2 | NM_001020818 |
| FOS | 3.2 | 6.3 | 4.8 | NM_005252 |
| TC2N | 5.9 | 2.3 | 4.1 | NM_001128595 |
| PTGS2 | 3.1 | 4.3 | 3.7 | NM_000963 |
| SIAH2 | 2.8 | 4.2 | 3.5 | NM_005067 |
| OTUD1 | 3.6 | 3.2 | 3.4 | NM_001145373 |
| RGS2 | 2.0 | 4.7 | 3.4 | NM_002923 |
| FAM62B | 2.9 | 3.7 | 3.3 | NM_020728 |
| KLF6 | 2.9 | 3.2 | 3.0 | NM_001160124 |
| TUBE1 | 2.8 | 3.3 | 3.0 | NM_016262 |
| FOSB | 2.8 | 3.3 | 3.0 | NM_001114171 |
| PSAT1 | 2.7 | 3.3 | 3.0 | NM_021154 |
| TMEM87A | 2.6 | 3.2 | 2.9 | NM_001110503 |
| CSDA | 3.1 | 2.6 | 2.9 | NM_001145426 |
| TEX9 | 2.0 | 3.6 | 2.8 | NM_198524 |
| JUN | 2.4 | 3.2 | 2.8 | NM_002228 |
| SCHIP1 | 2.8 | 2.8 | 2.8 | NM_014575 |
| ARL4C | 3.3 | 2.3 | 2.8 | NM_005737 |
| B3GNT2 | 3.1 | 2.5 | 2.8 | NM_006577 |
| HIPK1 | 2.9 | 2.6 | 2.8 | NM_152696 |
| LONRF1 | 2.5 | 3.0 | 2.7 | NM_152271 |
| FOSL2 | 2.1 | 3.3 | 2.7 | NM_005253 |
| TMEM70 | 2.7 | 2.6 | 2.6 | NM_001040613 |
| JUND | 2.3 | 2.8 | 2.5 | NM_005354 |
| NAB1 | 2.2 | 2.9 | 2.5 | NM_005966 |
| CDC14B | 2.1 | 2.9 | 2.5 | NM_001077181 |
| EXOC5 | 2.6 | 2.4 | 2.5 | NM_006544 |
| IFRD1 | 2.4 | 2.5 | 2.5 | NM_001007245 |
| ATP1B3 | 2.4 | 2.5 | 2.5 | NM_001679 |
| ANKRD28 | 2.4 | 2.5 | 2.4 | NM_015199 |
| LETM2 | 2.0 | 2.8 | 2.4 | NM_144652 |
| WSB1 | 2.2 | 2.7 | 2.4 | NM_015626 |
| RELL1 | 2.5 | 2.3 | 2.4 | NM_001085399 |
| PARL | 2.3 | 2.5 | 2.4 | NM_001037639 |
| TRIB1 | 2.1 | 2.7 | 2.4 | NM_025195 |
| NFKBID | 2.6 | 2.2 | 2.4 | NM_139239 |
| NUDT4 | 2.3 | 2.5 | 2.4 | NM_019094 |
| MNS1 | 2.1 | 2.7 | 2.4 | NM_018365 |
| ATP2B1 | 2.3 | 2.4 | 2.4 | NM_001001323 |
| PCTK2 | 2.7 | 2.1 | 2.4 | NM_002595 |
| PIP5K1B | 2.3 | 2.4 | 2.4 | NM_003558 |
| EIF5B | 2.2 | 2.5 | 2.3 | NM_015904 |
| TFG | 2.5 | 2.1 | 2.3 | NM_001007565 |
| SDCBP | 2.3 | 2.3 | 2.3 | NM_001007067 |
| SQLE | 2.3 | 2.3 | 2.3 | NM_003129 |
| ST8SIA4 | 2.0 | 2.5 | 2.3 | NM_005668 |
| PCGF5 | 2.3 | 2.2 | 2.2 | NM_032373 |
| RSPH10B2 | 2.4 | 2.1 | 2.2 | NM_001099697 |
| SLC25A13 | 2.3 | 2.2 | 2.2 | NM_001160210 |
| ANKRD12 | 2.3 | 2.1 | 2.2 | NM_001083625 |
| SLC4A7 | 2.0 | 2.4 | 2.2 | NM_003615 |
| ARL2BP | 2.1 | 2.3 | 2.2 | NM_012106 |
| SESN2 | 2.3 | 2.1 | 2.2 | NM_031459 |
| ZMYM6 | 2.1 | 2.2 | 2.2 | NM_007167 |
| ZFP36L1 | 2.3 | 2.0 | 2.2 | NM_004926 |
| SLC3A2 | 2.2 | 2.1 | 2.2 | NM_001012661 |
| AMMECR1 | 2.0 | 2.3 | 2.2 | NM_001025580 |
| GNG2 | 2.3 | 2.0 | 2.1 | NM_053064 |
| FAM107B | 2.0 | 2.2 | 2.1 | NM_031453 |
| TRIB3 | 2.1 | 2.2 | 2.1 | NM_021158 |
| CSNK2A1 | 2.1 | 2.1 | 2.1 | NM_001895 |
| NIPSNAP3B | 2.1 | 2.1 | 2.1 | NM_018376 |
| PPP1R2 | 2.1 | 2.0 | 2.1 | NM_006241 |
| PANK2 | 2.0 | 2.0 | 2.0 | NM_024960 |
| Early repression (3 h only) | ||||
| FAM46C | −3.3 | −2.8 | −3.0 | NM_017701 |
| LCP2 | −2.3 | −2.3 | −2.3 | NM_005565 |
| NOTCH2 | −2.2 | −2.1 | −2.1 | NM_024408 |
| AICDA | −2.2 | −2.0 | −2.1 | NM_020661 |