Table 3.

Late gene expression changes in stressed LCLs

Gene	LCL-06, 24 h	LCL-06, 72 h	Average	RefSeq Transcript ID
Late activation (24, 72 h only)
IL2	5.39	11.35	8.37	NM_000586
DGKI	4.25	12.48	8.37	NM_004717
FGFBP2	3.79	12.85	8.32	NM_031950
CTHRC1	6.77	8.23	7.50	NM_138455
SMPDL3A	8.45	5.79	7.12	NM_006714
GZMB	2.78	10.55	6.66	NM_004131
IFNG	2.29	10.58	6.43	NM_000619
GBP2	5.09	7.05	6.07	NM_004120
F5	5.16	6.77	5.97	NM_000130
SERPINA1	3.63	7.99	5.81	NM_000295 127704
PALLD	4.90	6.40	5.65	NM_016081
SORBS1	2.10	9.02	5.56	NM_001034954
GLYATL2	7.37	3.73	5.55	NM_145016
SERPINB2	5.84	5.14	5.49	NM_001143818
HS3ST1	4.70	6.02	5.36	NM_005114
MYOF	4.59	6.11	5.35	NM_013451
MAP1B	6.50	4.15	5.32	NM_005909
TNFRSF9	2.10	8.36	5.23	NM_001561
ASS1	4.07	5.96	5.01	NM_000050
XCL1	3.29	6.21	4.75	NM_002995
GPR56	4.08	5.32	4.70	NM_001145770
FILIP1L	4.12	4.96	4.54	NM_001042459
ETV7	3.42	5.45	4.43	NM_016135
PRF1	2.26	6.55	4.41	NM_001083116
CD72	4.01	4.54	4.27	NM_001782
PDZK1	4.31	4.08	4.19	NM_002614
DHRS9	3.76	4.49	4.12	NM_001142270
TMEM100	2.94	5.05	3.99	NM_001099640
HLF	2.21	5.72	3.97	NM_002126
S100A10	5.75	2.17	3.96	NM_002966
GSTA4	4.21	3.58	3.89	NM_001512
LAG3	2.78	4.83	3.80	NM_002286
LBH	2.28	5.24	3.76	NM_030915
CD109	3.73	3.69	3.71	NM_001159587
IL1R2	2.08	5.26	3.67	NM_004633
CCDC144A	3.55	3.77	3.66	NM_014695
SHC4	2.01	5.24	3.62	NM_203349
ENC1	2.44	4.68	3.56	NM_003633
ATP9A	2.02	5.01	3.51	NM_006045
ABAT	3.43	3.40	3.41	NM_000663
RUNDC3B	4.35	2.32	3.34	NM_001134405
GABRB2	4.48	2.13	3.30	NM_000813
COL5A2	3.71	2.86	3.29	NM_000393
ITK	2.35	4.15	3.25	NM_005546
AMY1A	3.11	3.39	3.25	NM_000699
ALDH1L2	3.43	3.01	3.22	NM_001034173
NKG7	2.40	4.05	3.22	NM_005601
DKK4	3.57	2.81	3.19	NM_014420
IGF2R	2.33	3.95	3.14	NM_000876
COL9A3	2.73	3.55	3.14	NM_001853
CAV1	2.14	4.11	3.12	NM_001753
PLEKHA7	3.96	2.25	3.10	NM_175058
CBS	3.24	2.96	3.10	NM_000071
CD160	3.44	2.74	3.09	NM_007053
SYNPO2L	2.45	3.70	3.07	NM_001114133
FYN	2.96	3.13	3.05	NM_002037
ITPRIPL2	2.58	3.45	3.01	NM_001034841
FNIP1	3.73	2.25	2.99	NM_001008738
RASSF6	3.54	2.39	2.97	NM_177532
GLT8D2	3.00	2.86	2.93	NM_031302
UGT2B4	3.71	2.14	2.93	NM_021139
ABCB4	2.60	3.16	2.88	NM_000443
GPT2	3.21	2.55	2.88	NM_001142466
PABPC1L	2.54	3.22	2.88	NM_001124756
PDE4DIP	2.40	3.35	2.87	NM_001002810
LRRC50	2.31	3.40	2.85	NM_178452
CACNA1A	2.49	3.18	2.84	NM_000068
BEND6	3.63	2.04	2.84	NM_152731
DDR2	2.76	2.91	2.84	NM_001014796
ASZ1	3.06	2.58	2.82	NM_130768
MYLK	2.44	3.10	2.77	NM_053025
SERPINB1	2.06	3.48	2.77	NM_030666
TMEM149	2.73	2.78	2.76	NM_024660
CACNA1D	3.16	2.17	2.67	NM_000720
ANK2	2.83	2.50	2.67	NM_001127493
NDFIP1	2.58	2.75	2.66	NM_030571
TNFRSF10D	2.60	2.70	2.65	NM_003840
FRY	2.02	3.24	2.63	NM_023037
ZDHHC11	2.69	2.53	2.61	NM_024786
TOX2	2.62	2.55	2.59	NM_001098796
BEX2	2.25	2.91	2.58	NM_032621
CCL5	2.93	2.17	2.55	NM_002985
PAM	2.25	2.84	2.55	NM_000919
ANKRD29	2.67	2.38	2.53	NM_173505
ZFYVE21	2.33	2.69	2.51	NM_024071
ATF5	2.43	2.53	2.48	NM_012068
TSC22D1	2.47	2.48	2.47	NM_006022
TPBG	2.35	2.55	2.45	NM_006670
SLC19A2	2.76	2.14	2.45	NM_006996
DBNDD2	2.05	2.83	2.44	NM_001048221
ABCB1	2.18	2.67	2.42	NM_000443
CCPG1	2.16	2.66	2.41	NM_004748
JAG1	2.27	2.54	2.41	NM_000214
PLA1A	2.23	2.58	2.40	NM_015900
BSPRY	2.47	2.33	2.40	NM_017688
NLRP1	2.10	2.67	2.39	NM_001033053
TM6SF1	2.46	2.31	2.38	NM_001144903
LPAR5	2.21	2.56	2.38	NM_001142961
TRIM2	2.29	2.46	2.37	NM_001130067
PHLDA1	2.48	2.25	2.37	NM_007350
TMEM22	2.14	2.56	2.35	NM_001097599
CCDC88A	2.61	2.05	2.33	NM_001135597
SPAG1	2.40	2.24	2.32	NM_003114
B3GNT7	2.30	2.33	2.31	NM_145236
ALDH8A1	2.48	2.14	2.31	NM_022568
GPR133	2.25	2.37	2.31	NM_198827
SPAG9	2.36	2.25	2.30	NM_001130528
PELI1	2.16	2.44	2.30	NM_020651
CEACAM21	2.33	2.24	2.29	NM_001098506
SNX18	2.32	2.23	2.27	NM_001102575
PCGF5	2.29	2.25	2.27	NM_032373
KIF1B	2.15	2.39	2.27	NM_015074
UNC84A	2.46	2.09	2.27	NM_001130965
CRIP1	2.34	2.20	2.27	NM_001311
IFT57	2.24	2.30	2.27	NM_018010
NINJ2	2.33	2.19	2.26	NM_016533
N4BP2L2	2.16	2.35	2.25	NM_014887
LTBP3	2.43	2.06	2.25	NM_001130144
MLLT11	2.11	2.37	2.24	NM_006818
PCGF5	2.40	2.08	2.24	NM_032373
ZBTB32	2.27	2.18	2.23	NM_014383
MBD6	2.05	2.40	2.22	NM_052897
WARS	2.05	2.38	2.22	NM_004184
CARS	2.22	2.20	2.21	NM_001014437
GCG	2.23	2.19	2.21	NM_002054
UBE2F	2.07	2.31	2.19	NM_080678
PEX5L	2.18	2.17	2.17	NM_016559
SUPT3H	2.30	2.03	2.17	NM_003599
FAM169A	2.04	2.26	2.15	NM_015566
ALG13	2.25	2.01	2.13	NM_018466
FRMD6	2.17	2.07	2.12	NM_001042481
ZNF79	2.05	2.20	2.12	NM_007135
TWSG1	2.11	2.11	2.11	NM_020648
FCHO2	2.10	2.11	2.11	NM_001146032
ERMP1	2.09	2.12	2.10	NM_024896
CNR1	2.19	2.02	2.10	NM_001160226
RAB3B	2.10	2.10	2.10	NM_002867
MPZL3	2.03	2.16	2.09	NM_198275
GBP1	2.04	2.13	2.09	NM_002053
DFNB59	2.05	2.12	2.09	NM_001042702
LOXL3	2.05	2.12	2.09	NM_032603
NEU1	2.08	2.09	2.08	NM_000434
RTTN	2.09	2.08	2.08	NM_173630
TESK1	2.11	2.05	2.08	NM_006285
RAPGEF2	2.00	2.13	2.07	NM_014247
PCGF5	2.06	2.06	2.06	NM_032373
DNASE2	2.02	2.08	2.05	NM_001375
PARP11	2.03	2.06	2.04	NM_020367
TWSG1	2.05	2.03	2.04	NM_020648
CTTN	2.02	2.05	2.04	NM_005231
Late repression (24, 72 h only)
MCM4	−2.61	−4.96	−3.78	NM_005914
FCRL4	−3.33	−3.77	−3.55	NM_031282
PRKCB	−3.88	−2.84	−3.36	NM_002738
STAT1	−3.31	−2.99	−3.15	NM_007315
CCNE2	−3.44	−2.57	−3.01	NM_057749
CT45A5	−3.98	−2.01	−2.99	NM_001007551
LMNB1	−3.08	−2.71	−2.89	NM_005573
BUB1	−2.79	−2.86	−2.83	NM_004336
NUCKS1	−2.82	−2.83	−2.83	NM_022731
RASSF5	−3.23	−2.39	−2.81	NM_182663
SFPQ	−2.79	−2.57	−2.68	NM_005066
RAD51L3	−2.76	−2.34	−2.55	NM_001142571
SLC29A1	−2.38	−2.62	−2.50	NM_001078174
SFRS1	−2.82	−2.17	−2.50	NM_001078166
TMPO	−2.25	−2.70	−2.48	NM_001032283
SCYL2	−2.52	−2.42	−2.47	NM_017988
WNT6	−2.42	−2.46	−2.44	NM_006522
CDV3	−2.56	−2.25	−2.40	NM_001134422
ESCO2	−2.43	−2.30	−2.36	NM_001017420
MRPL30	−2.14	−2.56	−2.35	NM_145212
CXCR7	−2.34	−2.29	−2.31	NM_020311
PDE7A	−2.50	−2.10	−2.30	NM_002603
EXOSC3	−2.13	−2.45	−2.29	NM_001002269
ATP6V0D2	−2.55	−2.03	−2.29	NM_152565
BAT2D1	−2.30	−2.25	−2.27	NM_015172
UNG	−2.10	−2.41	−2.26	NM_003362
RFC3	−2.28	−2.20	−2.24	NM_002915
NEXN	−2.22	−2.22	−2.22	NM_144573
POLH	−2.36	−2.08	−2.22	NM_006502
PKN2	−2.38	−2.01	−2.19	NM_006256
PNN	−2.32	−2.05	−2.18	NM_002687
SKP2	−2.27	−2.07	−2.17	NM_005983
GART	−2.02	−2.13	−2.08	NM_000819
PHTF2	−2.07	−2.06	−2.06	NM_001127357
POLE3	−2.06	−2.04	−2.05	NM_017443
PRPF18	−2.02	−2.02	−2.02	NM_003675