Table 2. Novel miRNAs predicted from peanut.
Name | Count | Sequence | Length (nt) | EST no* | Precursor length (nt) | Folding energy (kcal mol−1) |
miR1 | 1099 | GAGAUCAGAGAUGCACACAUUU | 22 | C20R5_004_B09 | 109 | −47.3 |
miR1* | 81 | AUGUGUGGGUUUCUGGUCUCCA | 22 | C20R5_004_B09 | 109 | −47.3 |
miR2 | 235 | GAGAUCAGAUCAUGUGGCAGU | 21 | C20R5_011_B12 | 92 | −33.6 |
miR3 | 5716 | UUCCAUACAUCAUCUAUCUAAC | 22 | C20R5_011_C07 | 116 | −53.2 |
miR4 | 9 | GGUUCUAGAUCGACGGUGGCA | 21 | C20R5_013_G06 | 76 | −21.9 |
miR5 | 12 | UUGGUAGCGGCGAAGCAGGA | 20 | C20R5_029_G05 | 100 | −43.2 |
miR6 | 37 | CAGGACCGGUGGAGUGUUAUGC | 22 | C20R5_054_H07 | 84 | −48.4 |
miR7 | 1481 | UUAUUGUCGGACUAAGGUGUCU | 22 | HS018_G07 | 114 | −49.1 |
miR7* | 1 | ACACUUAGUCUUGCGAUAACU | 21 | HS018_G07 | 114 | −49.1 |
miR8 | 157 | GACUAAUCUGUCGCGGAUCU | 20 | HS019_H02 | 270 | −87.2 |
miR9 | 5280 | GCUCAAGAAAGCUGUGGGAGA | 21 | HS049_E06 | 143 | −51.2 |
miR10 | 9 | GGGUUCUAGAUCGACGGUGGC | 21 | HS273_C01 | 246 | −68.4 |
miR11 | 5 | UGUAUGGUGGAUGUAGGCAUU | 21 | HS274_G03 | 161 | −56.3 |
miR12 | 16 | AAAGAUAACAUAUAACUCUGC | 21 | TFL_001_D10 | 117 | −21.9 |
miR13 | 8 | CAUACGAGUUGUAAGAAGAAU | 21 | TFL_007_A09 | 107 | −32.2 |
miR14 | 25 | GAGGAAGAGGAGGAUGAAGGCC | 22 | TFR6_007_H02 | 152 | −67.7 |
miR15 | 9 | AGAGCUCUCAACUACCGGAGA | 21 | TFR7_024_G09 | 106 | −47.4 |
miR16 | 1100 | AGAGAUCAGAGAUGCACACAUU | 22 | ES717218 | 131 | −50.3 |
miR16* | 82 | UGUGUGGGUUUCUGGUCUCCA | 21 | ES717218 | 131 | −50.3 |
miR17 | 5 | UUGUUUGCGAGUUGGGAUUUU | 21 | ES721379 | 139 | −58.1 |
miR18 | 37 | UCGCAGGACCGGUGGAGUGUUA | 22 | ES718804 | 123 | −58.8 |
miR19 | 8 | CAAGUGGUCUGCUACUAAAUU | 21 | GO257540 | 146 | −32.2 |
miR20 | 13 | UGAAUACCUCAUUCGGCCUCU | 21 | GO259494 | 343 | −74.6 |
miR21 | 9 | CACUGUUAUCAAUGGGUGUAUCU | 23 | GO266079 | 97 | −23.12 |
miR22 | 5 | GCUUGGAAGGAUGUUAGAGUA | 21 | GO268464 | 75 | −24 |
miR23 | 21 | UGACUGAAGUAGGAGGGAAAU | 21 | GO267334 | 141 | −63.4 |
miR24 | 28 | GGAGUGAAACUGAGAACACAAA | 22 | GO324297 | 151 | −59.8 |
miR25 | 26 | UAGGCUUAUGACCUCUUUCCA | 21 | GO325945 | 188 | −65.1 |
miR25* | 6 | GAAAGAGUUUAUAAGCCUACU | 21 | GO325945 | 188 | −65.1 |