Table 4.
TRPC-21A-MM family
| N | Unit (bp) | Chromo Bands | Arrays | GC% | Length (bp) | Var% |
|---|---|---|---|---|---|---|
| 1 | 42* | 3A2 | 1 | 49.3 | 4739 | 27 |
| 2 | 21 | 3A2, 4A2 | 7 | 50.1 | 5288 | 29 |
| 3 | 63 | 3A2,17A2 | 2 | 48.6 | 4417 | 29 |
| 4 | 42 | 16A2,17A2 | 2 | 48.2 | 29884 | 31 |
| 5 | 21 | 7D1,16A2,17A2 | 6 | 50.1 | 4956 | 29 |
| 6 | 21 | 3A2,4A2,17A2 | 7 | 48.9 | 7698 | 30 |
| 7 | 21 | 3A2,16A2,17A2 | 5 | 48.7 | 17198 | 31 |
| 8 | 21 | 3A2,7D1,16A2,17A2 | 18 | 49.5 | 15684 | 29 |
| 9 | 209 | 3A2,4A2,16A2,17A2 | 1 | 48.4 | 7481 | 29 |
| 10 | 21 | 3A2,4A2,7D1,16A2,17A2 | 1 | 49.4 | 8021 | 29 |
Arrays of the TRPC-21A-MM family (Heterogeneous superfamily, Table 2, C3). N - row index; Unit (bp) - minimal unit length; Chromo Bands - chromosomal positions in the reference genome; Arrays - number of arrays in WGS with similarity to those chromo bands; GC% - mean array GC content; Length (bp) - maximal array length; Var% - mean variability between monomers in array. All arrays have HOR and present in ChrUn, so correspondent columns are omitted from this table.
* this sequence was used for the FISH probes design.