Table 1.
Gene Location | |||||||||
---|---|---|---|---|---|---|---|---|---|
Intron 3–4 | Intron 4–5 | Intron 5–6 | 3′UTR | ||||||
Marker a | rs978437 | rs36210735 | rs7782965 | rs7800170 | rs1455858 | rs1378646 | rs1824024 | rs324650 | rs8191992 |
Location b | 136264718 | 136274187 | 136274673 | 136274860 | 136282243 | 136285541 | 136294234 | 136344201 | 136351848 |
rs978437 (A=.70; G=.30) c | 1.00 | 1.00 | 1.00 | .94 | .97 | .94 | .64 | .78 | |
rs36210735 (C=.55; T=.45) | .53 | 1.00 | 1.00 | .92 | .92 | .90 | .68 | .80 | |
rs7782965 (C=.71; T=.29) | .95 | .50 | 1.00 | .98 | .98 | .98 | .67 | .79 | |
rs7800170 (A=.55; C=.45) | .52 | .98 | .49 | .92 | .92 | .90 | .68 | .80 | |
rs1455858 (A=.30; G=.70) | .88 | .45 | .93 | .44 | 1.00 | 1.00 | .64 | .74 | |
rs1378646 (A=.69; G=.31) | .91 | .47 | .89 | .46 | .95 | .98 | .63 | .74 | |
rs1824024 (G=.31; T=.69) | .87 | .44 | .90 | .43 | .97 | .95 | .65 | .74 | |
rs324650 (A=.55; T=.45) | .22 | .45 | .23 | .46 | .22 | .22 | .23 | .79 | |
rs8191992 (A=.56; T=.44) | .33 | .61 | .33 | .61 | .30 | .31 | .30 | .60 |
Notes: UTR, untranslated region; A, adenine; C, cytosine; G, guanine; T, thymine; all SNPs were in Hardy-Weinberg equilibrium; D′ values are presented above the diagonal; R2 values are presented below the diagonal.
Markers are shown as rs numbers from the dbSNP database.
Locations are derived from estimates of chromosomal position in the dbSNP database (build 36.3), and are expressed in terms of base pairs.
Marker specific allele frequencies.