Table 3.
Porcine-specific proteins/peptides identified via proteomic analysis of NCA
| NCA region | Porcine Protein and Peptides Identified | Identical in Bovine Ortholog | XCorr | z | Unique ΔCn | Times Identified | Redundancy in Database |
|---|---|---|---|---|---|---|---|
| 140 kDa | alpha-2-macroglobulin precursor (163 kDa) | ||||||
| K.IKEEGTEVELTGK.G | No | 4.311 | 2 | 0.359 | 2 | 0 | |
| R.SSGSLLNNAIK.G | No | 3.07 | 2 | 0.343 | 2 | 5 | |
| R.TPQIITILEK.A | No | 2.95 | 2 | 0.324 | 2 | 0 | |
| R.KYSNPSTCFGGESQAICEK.F | No | 2.646 | 3 | 0.129 | 1 | 0 | |
| R.QEFEM*KLEVEAK.I | Yes | 1.823 | 3 | 0.079 | 1 | 1§ | |
| K.YGAATFTR.T | No | 1.716 | 2 | 0.17 | 1 | 10 | |
| 140 kDa | tenascin precursor (191 kDa) | ||||||
| K.ATLTGLRPGTEYGIGVSAVK.G | No | 4.872 | 3 | 0.564 | 1 | 0 | |
| R.LNYGLPSGQPVEVQLPR.N | No | 4.721 | 3 | 0.51 | 2 | 0 | |
| R.GLEPGQEYTILLTAEK.G | No | 3.424 | 2 | 0.388 | 2 | 0 | |
| R.VATYLPTPEGLK.F | Yes | 2.706 | 2 | 0.34 | 2 | 1§ | |
| K.ESSLTLLWR.T | No | 2.582 | 2 | 0.308 | 2 | 0 | |
| R.VPGDQTSTTIR.E | No | 2.418 | 2 | 0.301 | 2 | 4 | |
| 37 kDa | clusterin precursor (52 kDa) | ||||||
| R.ASNIM*DELFQDR.F | No | 4.341 | 2 | 0.449 | 1 | 0 | |
| R.KSLLSSLEEAKK.K | No | 3.739 | 3 | 0.231 | 2 | 0 | |
| K.TLIEQSNEERK.S | No | 3.135 | 2 | 0.232 | 2 | 0 | |
| R.QQSHVM*DIM*EDSFNR.A | No | 3.08 | 3 | 0.235 | 2 | 0 | |
| K.AISDKELQEM*STEGSK.Y | Yes | 3.051 | 3 | 0.333 | 2 | 1§ | |
| K.TLIEQSNEER.K | No | 2.692 | 2 | 0.326 | 3 | 0 |