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. 2011 Nov 11;413(5-3):1028–1046. doi: 10.1016/j.jmb.2011.09.008

Table 1.

Overview of tilt-pair statistics

Specimen Symmetry Particle size (Å) Molecular mass (MDa) Number of tilt pairs Number of particles Successful alignment (%) Angular error (°)
Mean Maximum
Rotavirus DLP I2 700 50 10 95 100/100 0.25 1.0
CAV I2 255 2.7 1 45 62/82 2.5 3.5
70S ribosomes C1 270 × 260 2.6 12 220 45/75 4.0 5.0
FAS D3 260 × 220 2.6 2 44 59/95 4.0 6.0
PDH-E2CD I1 280 1.6 1 50 62/94 3.0 4.0
Thermus V-ATPase C1 250 × 140 0.6 1 50 54/80 10.0 16.0
Bovine F-ATPase C1 250 × 140 0.6 1 29 52/79 20.0 25.0
DNA-PKcs C1 150 × 120 0.47 14 108 44/81 15.0 17.0
β-Galactosidase D2 180 × 130 × 95 0.45 2 119 74/91 10.0 14.0

The column labeled “symmetry” gives the particle point-group symmetry where I1 and I2 refer to the two icosahedral axis conventions: I1 is the convention used in the International Tables with a fivefold along the direction (01t) where t = (1 + √5)/2, whereas I2 is that defined earlier by Crowther et al.,2 with a fivefold along (10t).

In the column labeled “particle size”, one number is given if the particle is roughly spherical, two numbers when the particle is roughly in the shape of a tall cylinder, and three numbers when the particle is lozenge shaped.

In the column labeled “successful alignment”, the first number describes the percentage of particles whose tilt axis/tilt angle are within a circle whose radius in degrees is given by the number in the last column. The red circles in Figs. 2 to 5 are also drawn to represent this same angular error. The second number describes the percentage of particles whose tilt axis is in the plane of the specimen again to within the same angular error.

The penultimate column gives an estimate of the average angular orientation error derived from the clustering in the TPPP and is slightly smaller than the angle in the final column used to define the overall percentage of success.