Skip to main content
. 2011 Nov 7;11:102. doi: 10.1186/1472-6750-11-102

Table 1.

Primers used for STR amplification

STR Marker Forward Primer (5'-3') Reverse Primer (5'-3') Primer μM
D8S1106 [FAM]-GTTTACCCCTGCATCACTGG GTCAGAATTGCTCATAGTGCAAGA 0.045
DYS389 [FAM]-CCAACTCTCATCTGTATTATCTATG GTCTTATCTCCACCCACCAGA 0.200
D1S518 [VIC]-GCAGATCTTGGGACTTCTCG GTGTGGGCAACTGCATTAGAG 0.420
D6S1017 [VIC]-CTGGCACAGGATAGGTGCTC GATTGAACCAGATGGGAACGA 0.300
D17S1304 [NED]-ACCATGTCCTCTGGTTCTGG GTTTCTTACAGGTGGGACTTGGTGAAA 0.040
D4S2408 [NED]-TCATTTCCATAGGGTAAGTGAAAA GCCATGGGGATAAAATCAGA 0.200
D5S1467 [PET]-GCCTAAGGTGGTGAATTGGA GTGCATTATTGGAGGCTTTCTC 0.060
D19S245 [PET]-GACCTGCAATCAGCCATTTT GTTCTTGCAGTCTGTGGCTTG 0.360

Reverse primers that did not end in a guanine base at the 5'end were modified by adding an additional guanine (G) base or a "PIGtail" sequence (GTTTCTT) to the 5' end of the reverse primer (underlined) to promote complete adenylation [37]. Primer concentrations listed are final concentrations of forward and reverse primers in a 20 μL reaction volume. Primer concentrations were determined empirically based on peak height, DNA concentration, and number of cycles in the PCR program.