Table 2. Genetic pair-wise distance matrix for the Ugandan isolates.
Gene/Protein (no. of sequences analyzed) | Maximum Kimura 2P genetic distance (nt level), % | Maximum Poisson correction genetic distance (aa level), % |
PB2 (53)1 | 1.1 | 1.6 |
PB1 (57)1 | 1.7 | 1.8 |
PB1-F2 (49) | - | 6.0 |
PA (58)1 | 1.0 | 1.4 |
HA (59) | 1.2 | 1.7 |
NP (59) | 0.7 | 0.4 |
NA (59) | 0.9 | 1.3 |
NS (57) | 1.2 | - |
NS1 (57) | - | 2.0 |
NS2 (57) | - | 2.0 |
M (59) | 0.7 | - |
M1 (59) | - | 0.8 |
M2 (59) | - | 2.1 |
Partial sequences were included in the analysis of PB2, PB1, and PA genes.