Table 2.
C. reinhardtii Dynein Gene Nomenclature‡
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| Heavy Chains | |||
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| |||
| DHC1 | DHC1(IDA1, PF9) | Q9SMH3 | 1α heavy chain of inner arm I1/f |
| DHC2 | DHC2 | XP_001694660 | Inner arm dynein species d heavy chain |
| DHC3 | DHC3 | XP_001696272 | Inner arm dynein heavy chain (minor species) † |
| DHC4 | DHC4 | EDP07657 | Inner arm dynein heavy chain (minor species) † |
| DHC5 | DHC5 | XP_001699742 | Inner arm dynein species b heavy chain |
| DHC6 | DHC6 | XP_001700741 | Inner arm dynein species a heavy chain |
| DHC7 | DHC7 | XP_001692695 | Inner arm dynein species g heavy chain |
| DHC8 | DHC8 | XP_001692092 | Inner arm dynein species e heavy chain |
| DHC9 | DHC9(IDA9) | BAE19786 | Inner arm dynein species c heavy chain |
| DHC10 | DHC10(IDA2) | Q9MBF8 | 1β heavy chain of inner arm I1/f |
| DHC11 | DHC11 | XP_001694047 | Inner arm dynein heavy chain (minor species) † |
| DHC12 | DHC1a (PCR4) | EDP05194 | Inner arm dynein heavy chain# |
| DHC13 | ODA11 | Q39610 | α outer arm heavy chain |
| DHC14 | ODA4 | Q39565 | β outer arm heavy chain |
| DHC15 | ODA2 | Q39575 | γ outer arm heavy chain |
| DHC16 | DHC1b | Q9SMH5 | dynein heavy chain that mediates retrograde IFT |
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| WD-repeat Intermediate Chains | |||
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| DIC1 | ODA9 | Q39578 | IC1 from outer arm dynein |
| DIC2 | ODA6 | P27766 | IC2 from outer arm dynein |
| DIC3 | IDA7 | AAD45352 | IC140 from inner arm I1/f dynein |
| DIC4 | BOP5 | AAU93505 | IC138 from inner arm I1/f dynein |
| DIC5 | FAP133 | XM_001699649 | IFT dynein intermediate chain |
|
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| Light Intermediate Chains | |||
|
| |||
| DLI1 | D1bLIC | AAT37069 | Light intermediate chain of IFT dynein |
|
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| Leucine-rich repeat Proteins | |||
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| DLU1 | LC1(DLC1) | AAD41040 | Outer arm dynein γ heavy chain- associated |
| DLU2 | ODA8(MOT37) | EPD09919 | ODA8 protein required for outer arm assembly |
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| Thioredoxin-like Light Chains | |||
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| DLX1 | LC3(DLC3) | Q39592 | LC3 thioredoxin associated with outer arm β heavy chain |
| DLX2 | LC5(DLC5) | Q39591 | LC5 thioredoxin associated with outer arm α heavy chain |
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| Tctex1-like Light Chains | |||
|
| |||
| DLT1 | LC9 * | AAZ95589 | LC9 present in outer arm dynein |
| DLT2 | ODA12 | AAB58383 | LC2 present in outer arm dynein |
| DLT3 | TCTEX1 | AAC18035 | Tctex1 present in inner arm I1/f |
| DLT4 | TCTEX2b | DAA05278 | Tctex2b present in inner arm I1/f |
|
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| Roadblock-like Light Chains | |||
|
| |||
| DLR1 | ODA15(DLC7a) | AAD45881 | LC7a present in outer arm and inner arm I1/f dyneins |
| DLR2 | LC7b(DLC7b) | EDP03034 | LC7b present in outer arm and inner arm I1/f dyneins |
|
| |||
| DYNLL/LC8 Family Light Chains | |||
|
| |||
| DLL1 | FLA14 | Q39580 | LC8 present in outer arm, inner arm I1/f and IFT dyneins. Also a component of the radial spokes |
| DLL2 | ODA13 | Q39579 | Outer arm dynein LC6 |
| DLL3 | LC10(MOT24) | EDP00562 | Outer arm dynein LC10 |
|
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| Calmodulin Homologues | |||
|
| |||
| DLE1 | LC4(DLC4) | Q39584 | LC4 present in outer arm dynein. Binds Ca2+ |
| DLE2 | VFL2 | P05434 | Centrin present in monomeric inner arm dyneins b, e and g. This gene is also termed CNT1 (named for CeNTrin). Binds Ca2+ |
| DLE3 | ODA14 | AAP49435 | DC3 component of outer arm docking complex. Binds Ca2+ |
|
| |||
| Coiled Coil Proteins | |||
|
| |||
| DCC1 | ODA3 | AAC49732 | DC1 of the outer arm docking complex |
| DCC2 | ODA1 | AAK72125 | DC2 of the outer arm docking complex |
| DCC3 | ODA5 * | AAS10183 | Oda5 protein that associates with an adenylate kinase |
|
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| Outer Arm Dynein Interacting Proteins | |||
|
| |||
| DOI1 | LIS1* | ABG33844 | Lis1 protein associates with α heavy chain of outer arm |
|
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| Inner Arm Dynein Interacting Proteins | |||
|
| |||
| DII1 | IDA4 | Q39604 | p28 light chain present in inner arm species a, c and d |
| DII2 | FAP146 | BAG07147 | p38 associates with inner arm species d |
| DII3 | * | BAF98914 | p44 associates with inner arm species d |
| DII4 | IDA5 | P53498 | Actin, present in inner arm dynein species a, b, c, d, e, g and some minor species. This gene is also known as ACT1 (named for ACTin) |
| DII5 | NAP1 | AAC49834 | NAP, novel actin-related protein that can substitute for actin in inner arm dyneins b and g. This gene is also known as ARP12 (named for Actin Related Protein). |
| DII6 | FAP94 | EDP03678 | IC97 present in inner arm I1/f dynein |
| DII7 | FAP120 | EDP07339 | Ankyrin-repeat protein that interacts with IC138(DIC4) from inner arm I1/f |
|
| |||
| Dynein Assembly Proteins Containing a PIH Domain | |||
|
| |||
| DAP1 | PF13 (MOT45) | BAG69288 | PF13 protein required for inner/outer arm assembly in cytoplasm |
| DAP2 | IDA10 (MOT48) | BAI83444 | MOT48 protein required for inner arm assembly in cytoplasm¶ |
|
| |||
| Dynein Assembly Proteins containing WD Repeats | |||
|
| |||
| DAW1 | ODA16 | AAZ77789 | ODA16 protein acts as an IFT adaptor for outer arm dynein |
|
| |||
| Dynein Assembly Proteins containing Leucine-rich Repeats | |||
|
| |||
| DAU1 | ODA7 | Q09JZ4 | ODA7 is a LRR protein required for outer arm assembly in cytoplasm |
|
| |||
| Dynein Assembly Blocked | |||
|
| |||
| DAB1 | PF22 | AEC04845 | PF22 is required for assembly of outer arms |
‡
Alternative gene names are indicated in parentheses in the first two columns.
*
These genes were missing and/or not named in the Chlamydomonas version 3 genome catalogue.
#
T. Yagi (unpublished results).
†
Yagi et al. (2009)