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. 2011 Aug 23;62(15):5607–5621. doi: 10.1093/jxb/err245

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© 2011 The Author(s).

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

This paper is available online free of all access charges (see http://jxb.oxfordjournals.org/open_access.html for further details)

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Fig. 7. — Detailed expression profiles of genes in the major lignin biosynthetic pathway. The relative expression level was obtained by RNA-Seq after taking the equation and logarithmic transformations of TPM, and also by qPCR for data verification. White and black columns refer to G. hirsutum (susceptible) and G. barbadense (resistant), respectively. Error bars represent the SD for three independent experiments, and three technical replicates were analysed. CK, 4, 12, 24, and 48 on the x-axis refer to control and 4, 12, 24, and 48 h after inoculation with V. dahliae. The y-axis represents the relative expression level. (A) PAL, phenylalanine ammonia-lyase; (B) 4CL, 4-coumarate:CoA ligase; (C) C4H, cinnamate 4-hydroxylase; (D) CHS, chalcone synthase; (E) CCR, cinnamoyl CoA reductase; (F) CCoAOMT, caffeoyl-CoA O-methyltransferase; (G) CAD, cinnamyl alcohol dehydrogenase.