Table 2.
Top GO terms in gastric cancer datasets
| IGM | INTERSECTION | IGNORE | |||
|---|---|---|---|---|---|
| GO Term | p-value | GO Term | p-value | GO Term | p-value |
| Diffuse | |||||
| DNA metabolic process | 0 | regulation of mitosis | 7.80E-05 | regulation of progression through cell cycle | 5.83E-07 |
| cell division | 0 | mitotic cell cycle | 1.04E-03 | regulation of cell cycle | 5.83E-07 |
| cell cycle | 0 | mitosis | 1.22E-03 | regulation of mitosis | 9.78E-07 |
| mitotic cell cycle | 0 | mitotic cell cycle checkpoint | 1.22E-03 | response to endogenous stimulus |
1.11E-06 |
| Intestinal | |||||
| biological adhesion; | 0 | muscle contraction; | 3.40E-05 | biological adhesion | 3.13E-07 |
| cell adhesion; | 0 | muscle system process; | 3.40E-05 | cell adhesion | 3.13E-07 |
| muscle development; | 0 | muscle development; | 1.35E-03 | multicellular organismal process |
1.35E-05 |
| muscle contraction; | 2.80E-04 | multicellular organismal process; | 4.84E-03 | muscle contraction | 1.61E-05 |
Top four GO terms over-represented in the subset of genes that are prominently over-expressed in diffuse(first four terms) and intestinal (second four terms) subtypes of gastric cancer.