Table 1.
Interface | Surface | Core | All | |
---|---|---|---|---|
Complete dataset | ||||
α | 25.7 | 26.8 | 32.8 | 28.6 |
β | 18.4 | 15.9 | 32.6 | 21.7 |
loop | 36.3 | 37.4 | 23.0 | 32.6 |
border | 19.6 | 16.8 | 13.6 | 17.1 |
Homodimers/Heterodimers | ||||
α | 24.3/19.5 | 27.1/21.2 | 32.3/28.5 | 28.2/22.6 |
β | 18.8/25.2 | 15.1/20.4 | 32.1/38.7 | 21.1/26.0 |
loop | 37.3/36.9 | 37.6/38.7 | 23.8/22.3 | 33.2/34.3 |
border | 19.6/18.4 | 20.2/19.6 | 11.1/10.5 | 23.6/17.1 |
Obligate/Transient | ||||
α | 23.5/17.6 | 26.0/17.4 | 31.7/24.0 | 27.5/19.3 |
β | 18.6/22.7 | 15.0/23.3 | 29.7/38.9 | 20.4/27.8 |
loop | 37.5/40.8 | 38.2/39.9 | 25.4/26.7 | 33.8/36.2 |
border | 20.4/18.9 | 20.8/19.3 | 13.2/10.4 | 18.2/16.7 |
Bound/Unbound | ||||
α | 15.0/15.0 | 17.6/17.8 | 23.7/24.0 | 19.1/19.4 |
β | 18.2/17.7 | 21.9/22.0 | 39.7/40.1 | 26.9/27.1 |
loop | 46.4/46.8 | 40.1/40.0 | 25.1/24.8 | 36.2/36.2 |
border | 20.2/20.3 | 20.3/20.0 | 11.4/11.0 | 17.6/17.3 |
Percentage of secondary structures in the three protein compartments Interface, Surface, Core and their global proprotion in proteins (All) are given for the five datasets. Regular secondary structures are evaluated by α- and β-letters, non-regular ones by loop- and border-letters.