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. 2011 Feb 1;11:9. doi: 10.1186/1472-6807-11-9

Table 1.

Secondary structures distribution at protein interface, surface and core

Interface Surface Core All
Complete dataset
α 25.7 26.8 32.8 28.6
β 18.4 15.9 32.6 21.7
loop 36.3 37.4 23.0 32.6
border 19.6 16.8 13.6 17.1

Homodimers/Heterodimers
α 24.3/19.5 27.1/21.2 32.3/28.5 28.2/22.6
β 18.8/25.2 15.1/20.4 32.1/38.7 21.1/26.0
loop 37.3/36.9 37.6/38.7 23.8/22.3 33.2/34.3
border 19.6/18.4 20.2/19.6 11.1/10.5 23.6/17.1

Obligate/Transient
α 23.5/17.6 26.0/17.4 31.7/24.0 27.5/19.3
β 18.6/22.7 15.0/23.3 29.7/38.9 20.4/27.8
loop 37.5/40.8 38.2/39.9 25.4/26.7 33.8/36.2
border 20.4/18.9 20.8/19.3 13.2/10.4 18.2/16.7

Bound/Unbound
α 15.0/15.0 17.6/17.8 23.7/24.0 19.1/19.4
β 18.2/17.7 21.9/22.0 39.7/40.1 26.9/27.1
loop 46.4/46.8 40.1/40.0 25.1/24.8 36.2/36.2
border 20.2/20.3 20.3/20.0 11.4/11.0 17.6/17.3

Percentage of secondary structures in the three protein compartments Interface, Surface, Core and their global proprotion in proteins (All) are given for the five datasets. Regular secondary structures are evaluated by α- and β-letters, non-regular ones by loop- and border-letters.