Table 3.
Meta-analysis for PTPN22 rs2476601 in AAV
| Controls this study//Jagiello1 |
AAV cases this study//Jagiello1 |
||||
|---|---|---|---|---|---|
| n 7412//399 |
Frequency | n 626//199 |
Frequency | Combined P value |
|
| GG | 6044//323 | 0.82//0.81 | 471//142 | 0.75//0.71 | |
| GA | 1298//72 | 0.18//0.18 | 146//52 | 0.23//0.26 | |
| AA | 70//4 | 0.01//0.01 | 9//5 | 0.01//0.03 | 2.2 × 10-6 * |
| G | 13386//718 | 0.90//0.90 | 1088//336 | 0.86//0.84 | |
| A | 1438//80 | 0.10//0.10 | 164//62 | 0.13//0.16 | 4.2 × 10-7 ** § |
1 Data from Jagiello et al [11]
* P value calculated by χ2 test on 3 × 2 contingency table
** P value calculated by χ2 test on 2 × 2 contingency table
§ OR for minor allele = 1.48