Table 1.
Namea | Peach EST database accession number | Arabidopsis homolog locusb | Arabidopsis locus description | Function | Identities (%) |
---|---|---|---|---|---|
18S rRNA | TC1229 | AT3G41768 | 18S ribosomal RNA | Cytosolic small ribosomal subunit, translation | 97 |
ACT | TC1223 | AT5G09810 | Actin 2/7 | Structural constituent of cytoskeleton | 85 |
CYP2 | TC1916 | AT3G63400 | Cyclophilin (CYP2) | Protein folding, RNA splicing | 87 |
TEF2 | TC3544 | AT1G56070 | Translation enlongation factor 2 | Translation factor activity, nucleic acid binding | 100 |
GAPDH | TC3113 | AT1G13440 | Glyceraldehyde-3-phosphate dehydrogenase | glycolysis | 84 |
PLA2 | DY636283 | AT2G19690 | Phospholipase A2 beta | Phospholipid metabolic process | 71 |
RP II | TC1717 | AT2G15430 | RNA polymerase subunit | DNA-directed RNA polymerase activity, DNA binding | 73 |
RPL13 | TC5178 | AT5G23900 | 60S ribosomal protein L13 (RPL13D) | Structural constituent of ribosome | 100 |
TUA | TC2873 | AT5G19780 | Tublin alpha-5 | Cytoskeleton structural protein | 100 |
TUB | TC3624 | AT1G75780 | Tublin beta-1 | Unidimensional cell growth, response to light stimulus | 100 |
UBQ10 | TC2782 | AT4G05320 | Ubiquitin 10 | Protein modification process, protein binding | 83 |
All peach ESTs were named based on similarity to Arabidopsis proteins determined via BLASTX. b Closest Arabidopsis homolog identified using TAIR BLAST [64]. AGI proteins database was queried with peach nucleotide sequences using BLASTX or in the case of 18S rRNA, Arabidopsis genome database with BLASTN.