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. Author manuscript; available in PMC: 2012 Nov 1.
Published in final edited form as: J Mol Graph Model. 2011 Sep 18;31:76–86. doi: 10.1016/j.jmgm.2011.09.004

Table 8.

Performance of the 10 initially best-ranked and subsequent most accurate pharmacophore models from training set C.

Training Set Metrics Test Set Metrics
# Overlap Accuracy p Hits TP FP Hit rate Recovery
%
Negative
Accuracy
1 2.6127 0.5 0 289 78 211 21.3 36.6 39.0
2 2.6025 0.5 0 321 82 239 20.3 43.4 30.9
3 2.5972 0.625 −0.1154 173 60 113 25.8 20.5 67.3
4 2.5426 0.5 0 285 80 205 21.9 36.2 40.8
5 2.5225 0.625 −0.1154 207 68 139 24.7 24.7 59.8
6 2.5216 0.625 −0.1154 271 75 196 21.7 33.3 43.4
7 2.5173 0.625 −0.1154 220 65 155 22.8 25.4 55.2
8 2.5037 0.5 0 237 61 176 22.4 26.4 49.1
9 2.5031 0.5 0 367 106 261 22.4 24.7 24.6
10 2.4078 0.625 −0.1154 219 62 157 22.0 27.0 54.6
42 2.2121 0.75 −0.3507 116 32 84 21.6 27.0 90.8