Table 1.
QRDR mutationsb | MIC (mg/L)c | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EtBr | CIP | NOR | NAL | ||||||||||||
Isolatea | PFGE pattern |
GrlA | GyrA | No | + | + | No | + | + | No | + | + | No | + | + |
EI | TZ | CPZ | EI | TZ | CPZ | EI | TZ | CPZ | EI | TZ | CPZ | ||||
ATCC25923 | - | WT | WT | 6.25 | 0.75 | 0.75 | 0.25 | 0.125 | 0.125 | 0.5 | 0.125 | 0.125 | 64 | n.d. | n.d. |
ATCC25923EtBr | - | WT | WT | 200 | 25 | 12.5 | 1 | 0.25 | 0.25 | 2 | 0.25 | 0.25 | 64 | n.d. | n.d. |
SM1 | A2 | S80Y/E84K | S84L | 16 | 4 | 4 | 128 | 32 | 64 | 512 | 128 | 256 | 256 | 64 | 64 |
SM10 | A4 | S80Y/E84K | S84L | 16 | 2 | 4 | 128 | 64 | 64 | 512 | 128 | 128 | 128 | 64 | 64 |
SM14 | A3 | S80Y/E84K | S84L | 16 | 4 | 4 | 256 | 32 | 128 | 1024 | 128 | 256 | 256 | 64 | 64 |
SM17 | A4 | S80Y/E84K | S84L | 16 | 4 | 4 | 256 | 64 | 64 | 1024 | 256 | 512 | 256 | 64 | 64 |
SM25 | A1 | S80Y/E84K | S84L | 8 | 2 | 4 | 128 | 32 | 64 | 512 | 64 | 128 | 256 | 32 | 64 |
SM27 | A4 | S80Y/E84K | S84L | 16 | 4 | 4 | 256 | 32 | 64 | 512 | 128 | 256 | 256 | 64 | 64 |
SM43 | A1 | S80Y/E84K | S84L | 16 | 2 | 4 | 128 | 64 | 64 | 512 | 128 | 128 | 512 | 256 | 64 |
SM46 | A1 | S80Y/E84K | S84L | 16 | 4 | 4 | 128 | 64 | 64 | 512 | 128 | 256 | 128 | 64 | 64 |
SM47 | A1 | S80Y/E84K | S84L | 8 | 2 | 4 | 256 | 32 | 64 | 512 | 128 | 256 | 256 | 64 | 64 |
SM48 | A1 | S80Y/E84K | S84L | 8 | 4 | 4 | 256 | 32 | 64 | 512 | 128 | 256 | 256 | 64 | 64 |
SM50 | B1 | S80F/E84K | S84L | 8 | 1 | 2 | 64 | 16 | 16 | 256 | 32 | 64 | 128 | 64 | 64 |
SM52 | C1 | E84K | S84L | 16 | 1 | 2 | 16 | 8 | 8 | 64 | 32 | 32 | 128 | 32 | 64 |
SM2 | B2 | S80F/E84K | S84L | 8 | 2 | 2 | 32 | 16 | 16 | 128 | 32 | 32 | 64 | 16 | 64 |
SM3 | E1 | S80Y/E84K | S84L | 1 | 1 | 1 | 16 | 8 | 8 | 64 | 32 | 32 | 64 | 16 | 16 |
SM4 | E2 | S80F | S84L | 4 | 2 | 1 | 8 | 8 | 8 | 64 | 32 | 32 | 64 | 32 | 64 |
SM5 | E3 | S80Y/E84K | S84L | 4 | 2 | 1 | 32 | 16 | 16 | 128 | 64 | 64 | 64 | 32 | 32 |
SM6 | A5 | S80F | E88K | 4 | 2 | 1 | 16 | 16 | 16 | 64 | 32 | 32 | 64 | 32 | 32 |
SM7 | E1 | S80F | S84L | 2 | 2 | 1 | 8 | 8 | 4 | 64 | 32 | 32 | 128 | 32 | 64 |
SM8 | A5 | S80F | E88K | 4 | 2 | 1 | 16 | 8 | 16 | 128 | 64 | 64 | 128 | 32 | 64 |
SM12 | E1 | S80F | S84L | 2 | 2 | 1 | 16 | 8 | 8 | 64 | 32 | 32 | 128 | 32 | 64 |
SM16 | A6 | S80F | E88K | 4 | 2 | 1 | 16 | 16 | 16 | 128 | 32 | 64 | 64 | 32 | 64 |
SM22 | A1 | S80Y/E84G | S84L | 8 | 4 | 4 | 128 | 16 | 32 | 512 | 128 | 128 | 64 | 32 | 64 |
SM34 | D1 | S80F/E84K | S84L | 4 | 2 | 2 | 64 | 16 | 32 | 64 | 16 | 32 | 32 | 16 | 32 |
SM36 | E1 | S80F | S84L | 4 | 2 | 2 | 16 | 8 | 8 | 64 | 16 | 32 | 128 | 32 | 64 |
SM40 | E1 | S80F | S84L | 8 | 4 | 4 | 32 | 32 | 32 | 512 | 128 | 128 | 16 | 8 | 16 |
aIsolates in bold correspond to the EtBrCW-positive isolates. bWT: wild-type; S: serine; F: phenylalanine; E: glutamate; K: lysine; Y: tyrosine; L: leucine; G: glycine. cValues in bold-type correspond to a MIC decrease of ≥ four-fold in the presence of the efflux inhibitor (EI) in comparison to the values with no EI [10]. The concentration of each EI used is defined in the Methods section. EtBr: ethidium bromide; CIP: ciprofloxacin; NOR: norfloxacin; NAL: nalidixic acid; TZ: thioridazine; CPZ: chlorpromazine; n.d.: not determined.