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. Author manuscript; available in PMC: 2011 Nov 30.
Published in final edited form as: J Immunol. 2009 Dec 16;184(2):702–712. doi: 10.4049/jimmunol.0902360

Table II.

KEGG gene sets enriched in invasive TAMs and associated statistics

Gene Set Gene
Set Size		 Enrichment
Score		 Normalized
Enrichment Score		 Nominal
p Value		 FDR
q Value		 Rank
at Max
HSA01430_CELL_COMMUNICATION 121 0.59563637 2.6974535       0       0 3511
HSA05217_BASAL_CELL_CARCINOMA 55 0.5553169 2.1564224       0 4.06 × 10−4 4580
HSA04512_ECM_RECEPTOR_INTERACTION 83 0.45781794 1.9435273       0 0.00513476 2211
HSA04530_TIGHT_JUNCTION 124 0.39952913 1.808554       0 0.0177126 3194
HSA03010_RIBOSOME 61 0.44803682 1.7929574 8.62 × 10−4 0.01682182 6356
HSA04340_HEDGEHOG_SIGNALING_PATHWAY 54 0.44944367 1.7346396 8.31 × 10−4 0.02487251 5313
HSA04950_MATURITY_ONSET_DIABETES_OF_THE_YOUNG 25 0.4811138 1.5646982 0.0249273 0.08812157 4153
HSA04742_TASTE_TRANSDUCTION 39 0.4193784 1.5260606 0.02017655 0.10253292 3603
HSA04360_AXON_GUIDANCE 124 0.31950954 1.4521579 0.0087222 0.15447515 2581
HSA04310_WNT_SIGNALING_PATHWAY 140 0.29928747 1.3827081 0.02131439 0.22107984 3271
HSA04916_MELANOGENESIS 96 0.31248757 1.3567276 0.03821103 0.23827241 2987