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. Author manuscript; available in PMC: 2011 Nov 30.
Published in final edited form as: J Mol Biol. 2010 Feb 12;398(1):8–25. doi: 10.1016/j.jmb.2010.02.009

Table 1.

Thermodynamic and spectroscopic parameters characterizing the binding of the E. coli PriB protein to etheuoderivatives of ssDNA oligomers in buffer C (pH 7.0, 10°C)*

14-mer 16-mer 18-mer 20-mer 24-mer 26-mer 30-mer 35-mer
dεA(pεA)13 dεA(pεA)15 dεA(pεA)17 dεA(pεA)19 dεA(pεA)23 dεA(pεA)25 dεA(pεA)29 dεA(pεA)34
Stoichiometry 1 ± 0.1 1 ± 0.1 1 ± 0.1 1 ± 0.1 2 ± 0.2 2 ± 0.2 2 ± 0.2 2 ± 0.2
Site-size p 12 12 12 12 12 12 12 12
KN (M−1) (5.2 ± 0.7) × 105 (9.0 ± 1.3) × 105 (1.3 ± 0.2) × 106 (1.7 ± 0.2) × 106 - - - -
Ki (M−1) (1.7 ± 0.2) × 105 (1.8 ± 0.3) × 105 (1.9 ± 0.3) × 105 (1.9 ± 0.3) × 105 (2.5 ± 0.4) × 105 (2.8 ± 0.5) × 105 (2.8 ±0.5) × 105 (1.5 ±0.3) × 105
ω - - - - 50 ± 10 45 ± 10 45 ± 10 45 ± 10
ΔF1 - - - - 0.90 ± 0.03 0.80 ± 0.03 0.70 ± 0.03 0.9 ± 0.03
ΔFmax 0.77 ± 0.03 1.04 ± 0.03 1.19 ± 0.03 1.18 ± 0.03 1.32 ± 0.2 1.14 ± 0.03 1.22 ± 0.03 2.0 ± 0.05
*

The errors are standard deviations determined using 3–4 independent titration experiments.