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. Author manuscript; available in PMC: 2012 Nov 16.
Published in final edited form as: Bioconjug Chem. 2011 Oct 28;22(11):2345–2354. doi: 10.1021/bc200424r

Table 1.

Spectral properties of quenchers conjugated at the 5’-terminus of 20mer and 15mer oligonucleotides.

20mer 15mer

Quencher λmax Δλ(half max) λmax Δλ(half max)
MPQ1 557 nm 481 - 618 (137 nm) 560 nm 481 - 619 (138 nm)
MPQ2 614 nm 522 - 676 (154 nm) 524 nm 446 - 640 (194 nm)
MPQ3 521 nm 461 - 574 (113 nm) 529 nm 478 - 571 (93 nm)
MPQ4 539 nm 467 - 606 (139 nm) 551 nm 469 - 611 (142 nm)
MPQ5 503 nm, 623 nm 447 - 689 (242 nm) 646 nm 524 - 723 (199 nm)
MPQ6 536 nm, 656 nm 463 - 731 (268 nm) 537 nm, 657 nm 463 - 736 (273 nm)
Dabcyl 472 nm 405 - 520 (115 nm) 472 nm 405 - 519 (114 nm)
BHQ2 580 nm 503 - 649 (146 nm) 581 nm 507 - 652 (145 nm)