Skip to main content
. Author manuscript; available in PMC: 2011 Nov 30.
Published in final edited form as: Ann Appl Stat. 2011 Sep 1;5(3):2052–2077. doi: 10.1214/11-AOAS469

Table 1.

Number of blocks inferred in HLA data sets

Data BEAM2 BEAM2-10p HapBlock-1 HapBlock-2 HapBlock-3
100 haplotypes 32 39 20 30 34
50 genotypes 81 87 46 147 106
1,000 genotypes 35 36 56 184 268

“BEAM2-10p” denotes BEAM2 applying a 10 times larger prior probability than the default prior on the block boundary variable. HapBlock-1, 2, 3 denotes HapBlock applying three different block partition rules.