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. 2011 Feb 9;12:50. doi: 10.1186/1471-2105-12-50

Table 3.

Information stored in Dr. PIAS.

Information Source(s) or program(s) used
Structural information
 Tertiary structures [22-24]
 Pockets on PPI interface [25]
  Volume [6,25]
  Accessible surface area [6,25]
  Compactness [6]
  Planarity [6]
  Narrowness [6]
  Curvature [26]
  Roughness [26]
  Amino acid composition [6,24,25,27]
 Domains [28,29]
 Disordered regions [37]
 Amino acid sequence motifs [38,39]
Drug/chemical information
 FDA-approved drugs [40]
 Chemicals associated with interacting proteins [41]
Functional information
 Human diseases in OMIM [42]
 Number of interacting proteins in PPI network [6]
 Biological pathways [43,44]
 GO terms and identity scores of GO terms [6,45]
 Gene expression profiles and similarity scores of profiles [6,46]
 Paralogs [43,47]