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. 2011 Nov 10;11:156. doi: 10.1186/1471-2229-11-156

Table 6.

Set of gene specific primer pairs used to produce TILLING 2nd PCR amplicons.

Allele Exon primer forward (5'-3') Primer Reverse (5'-3') Size (bp)
II ccactgaccgactcact atggacggggagattgg 215
III tcactattgtagtcatccttgcat tgaagatttcccggcacg 156
IV tggtttcgttagtctgctct tgagcgaaagtagcggg 313
V tttgggtatgcctccgt tggaggcgcttcataatact 163
VI ttgctctaaatttatgatctggct aggtggaagattgccaag 153
SBEIIa-A VII tgctcctattgatgccgat gctacatgctcaactaaataattgg 152
VIII ctctgcccactaagggt aaatttcatttaataatgtaatggagatcg 204
IX ccttttgtgaccatttactaaggata accagaaacaggtgaaataact 157
X acaatacttagaggatgcatctga ggtgaagaggcgcataca 212
XI ggtatttctgacttgtatgaccatt accagataaacagtaaagcagc 223
XII gttgcattgcttcatcaatgatt caaatatggtgacagaagtcagag 237
XIII tgttaaatctgttcttacacatgtcg catagcaattatttcagtgccct 266

IV aacacactgctaaatttgaatgat agactagtggaggcgtt 19
V tgctgaaggtatcatctaattgc tgaccattaacaatagattagaaggtg 159
SBEIIa-B VI cagttactctaaatttatgatctggct aggtggaagattgccaag 134
VII cctattgatgccgatatttgatatg tcctcgactaaataattggccag 152
VIII aactctgcctactaagggt acactggaaattccatttaataatgtaac 204
IX ccttttgtgaccatttactaaggata ccggaaacaggtgaaataact 157

II actattgtagtcatccttgcatt atgaagatttaccggcacg 157
III tcagtctgctctacaattgctat gaaagcagcgggtaggc 301
IV gggtatacctcggtggattc agactagtggaggcgttt 167
V gaaggtatcgtctaattgcatatct caataaattggaaggtgtctcgtt 154
SBEIIa-D IX accatttactaaggatatttacatgcaa accagaaacaggtgaaataact 151
X acaatacttagaggatgcatctga ggtgaagaggcgcataca 212
XI ggtatttctgacttgtatgaccatt accagataaacagtaaagcagc 223
XII gttgcattgcttcatcaatgatt caaatatggtgacagaagtcagag 237
XIII tgttaaatctgttcttacacatgtcg catagcaattatttcagtgccct 266