Table 1. Genome-wide association of SNPs with patterns.

Pattern	Lead SNP associated to the pattern at the locus	Chr	Position (bp)	Genes nearby (genes cis regulated by the SNP are underlined)	P-value for the SNP-pattern associationa	Variance of the pattern explained by the SNP (R2)	Number of genes within the module	Number of expression traits associated to the SNP within the moduleb	P-value for enrichment in expression traits associated to the SNP within the modulec	SNP-pattern association potentially due to contamination (type of cell incriminated)
33	rs2300573	1	166560874	TBX19	3.15 E-08	0.023	176	18	1.25 E-34	No
21	rs13023213	2	86875454	CD8A	7.52 E-08	0.022	292	36	3.08 E-59	Yes (T cells)
12	rs12485738	3	56840816	ARHGEF3	8.76 E-24	0.069	379	288	<1.0 E 250	Yes (platelets)
93	rs1344142	3	56832473	ARHGEF3	1.48 E-18	0.054	135	61	1.05 E-60	Yes (platelets)
48	rs13196564	6	91563760	MAP3K7	5.24 E-08	0.022	311	7	5.24 E-10	Yes (B cells)
66	rs2842892	6	132856076	STX7	9.40 E-08	0.019	137	5	1.30 E-10	No
35	rs12705417	7	77856777	MAGI2	1.23 E-08	0.024	395	10	6.96 E-16	Yes (erythrocytes)
7	rs1058348	10	11342351	CUGBP2	3.49 E-08	0.020	189	49	1.45 E-46	No
62	rs653178	12	110492139	ATXN2, SH2B3	2.36 E-09	0.026	62	5	5.49 E-10	No
98	rs11177644	12	68072015	LYZ, YEATS4	1.14 E-92	0.248	45	36	1.22 E-86	No
102	rs11171739	12	54756892	RPS26, SUOX	2.89 E-70	0.194	14	7	2.45 E-21	No

^a P-values<10⁻⁷ were considered for SNP-pattern associations;

^b P-values<10⁻⁵ were considered for associations between the SNP and expression traits within the module;

^c P-values<1.15×10⁻⁹ were considered for the enrichment in expression traits associated to the SNP within the module.