Table 2. Strain-specific SNPs/deletions in the five clock genes in Drosophila triauraria.

per	ONM	GAAGAGCACCTTCTGCGTGATGT(180bp)GCAGCTACAAGGGTAAGTGG* *
	OEB12	GAAGAGCACGTTCTGCGTGATGT(180bp)GCAGCTACAAGGGTGAGTGG* *
tim	ONM	TTTATTTA------------AGTATTAT(45bp)GAGGATATATCTAATC************ *
		TTTATTTATAAATTATCTTATTTATTAT(45bp)GAGGATATCTCCAATC************ *
	OEB12	TTTATTTATAAATTATCTTATYWATTAT(45bp)GAGGATATATCYAATC<1/emph>************ *
		TTTATTTATAAATTATCTTATYWATTAT(45bp)GAGGATATTTCYAATC************ *
Clk	ONM	TATATGCCGTTCGAGGTGCTAGGCACCTCTGGTTATGATTACTATCACTT*
	OEB12	TATATGCCGTTYGAGGTGCTGGGCACYTCYGGYTAYGATTACTATCACTT*
cyc	ONM	GAGCTTAAGATG(32bp)CGTGGTAGGTTGT(146bp)GTGCCCTAGGGA* * *
	OEB12	GAGCTCAAGATG(32bp)CGTGGTGGGTTGT(146bp)GTGCCCCAGGGA* * *
cry	ONM	AGAGGTAACAGGTTCAGTTACGGYTGTATTGCTTTAGTTTTAACTTTWTT************ *
	OEB12	AGAGGTAACAGGTTCAGTTACGGCTGTACTGCTTTAGTTTTAACTTTATT************ *
		AGAGGTAAC------------GGTTGTATTGTTTTAGTTTTAACTTTATT************ *

Asterisks indicate SNPs/deletions used as strain-specific markers. Boldface characters show coding regions equivalent to the D. melanogaster sequences used for comparison. Two types of sequences were found in ONM and OEB12 in the case of tim, and in OEB12 in the case of cry.