Table 2. CpG sites with the most significant age-associated changes.
Reference ID | Gene | Age-associated R-values | |||||
---|---|---|---|---|---|---|---|
all samples of training group | dermis | epidermis | cervical smear | CD14+ monocytes | CD4+ T-cells | ||
Pavlidis Template Matching was used to identify CpG sites with the most significant age-associated changes. 19 CpG sites revealed hypermethylation with a Pearson correlation coefficient R of > 0.6 in all samples of the training group. Significant age-associated correlations were also observed in most individual datasets. CpG sites of the Epigenetic-Aging-Signature are indicated in grey. *One additional hypomethylated CpG site (cg23571857) was included in the predictor. | |||||||
cg06572160 | KCNC3 | 0.70 | 0.73 | 0.87 | 0.24 | 0.41 | 0.50 |
cg07533148 | TRIM58 | 0.69 | 0.68 | 0.76 | 0.35 | 0.38 | 0.52 |
cg20616414 | WNK2 | 0.67 | 0.66 | 0.87 | 0.31 | 0.32 | 0.33 |
cg17861230 | PDE4C | 0.67 | 0.92 | 0.91 | 0.42 | 0.38 | 0.22 |
cg25302419 | CTNND2 | 0.67 | 0.65 | 0.68 | 0.33 | 0.59 | 0.55 |
cg25802093 | SPAG6 | 0.64 | 0.63 | 0.82 | 0.34 | 0.31 | 0.72 |
cg06458239 | ZNF549 | 0.63 | 0.88 | 0.85 | 0.15 | −0.13 | 0.45 |
cg27009703 | HOXA9 | 0.63 | 0.66 | 0.90 | 0.29 | 0.30 | 0.56 |
cg02844545 | GCM2 | 0.63 | 0.75 | 0.77 | 0.35 | 0.66 | 0.47 |
cg01683883 | CMTM2 | 0.63 | 0.83 | 0.80 | 0.17 | −0.18 | 0.21 |
cg01530101 | KCNQ1DN | 0.63 | 0.91 | 0.67 | 0.16 | 0.33 | 0.45 |
cg12799895 | NPTX2 | 0.62 | 0.78 | 0.75 | 0.04 | 0.46 | 0.35 |
cg21907579 | TBX5 | 0.62 | 0.74 | 0.73 | 0.25 | 0.21 | 0.35 |
cg00107187 | FLJ42486 | 0.62 | 0.89 | 0.65 | 0.25 | 0.45 | 0.44 |
cg16313343 | BRF1 | 0.62 | 0.79 | 0.74 | 0.17 | −0.12 | 0.25 |
cg25148589 | GRIA2 | 0.62 | 0.90 | 0.91 | 0.52 | 0.25 | 0.34 |
cg23290344 | NEF3 | 0.61 | 0.68 | 0.71 | 0.26 | 0.44 | 0.52 |
cg02681442 | FOXG1B | 0.60 | 0.68 | 0.79 | 0.08 | 0.35 | 0.41 |
cg03158400 | FAM3B | 0.60 | 0.71 | 0.70 | 0.37 | 0.13 | 0.66 |
cg23571857 | BIRC4BP | −0.45* | −0.66 | −0.84 | −0.18 | −0.11 | −0.40 |