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. Author manuscript; available in PMC: 2011 Dec 6.
Published in final edited form as: FEBS J. 2008 Jan 8;275(4):655–670. doi: 10.1111/j.1742-4658.2007.06227.x

Table 3. Effects of the ratio of guanosine to uridine nucleotide concentrations on binding of PyrR to BcBL2.

The total concentration of nucleotides was held constant at 1 mM.

Concentration of nucleotide (μM)
Kd value for RNA (nM) Concentration of nucleotide (μM)
Kd value for RNA (nM)
GMP UMP GTP UTP


0 0 0.13 0 0 0.13
0 1000 0.06 0 1000 0.05
100 900 0.06 50 950 0.06
250 750 0.05 150 850 0.09
500 500 0.11 250 750 0.11
750 250 0.29 500 500 0.17
900 100 0.84 750 250 0.40
950 50 1.1 900 100 0.61
1000 0 9.8 1000 0 0.75