Table 2.
Bacterial species/phylotypes | |
---|---|
with antibiotics
| |
Abiotrophia defectiva | Oribacterium sp. oral taxon 372** |
Actinomyces cardiffensis | Propionibacterium acnes |
Bacteroidales oral clone MCE7_20 | Pyramidobacter piscolens |
Chloroflexi genomosp. P1 | Shuttleworthia satelles |
Desulfobulbus sp. oral taxon 041*** | Solobacterium moorei |
Dialister pneumosintes | Streptococcus constellatus subsp. constellatus |
Eubacterium sp. oral clone BP1-41 | Streptococcus genomosp. C3 |
Firmicutes oral clone AO068** | Streptococcus gordonii |
Granulicatella adiacens | Streptococcus milleri |
Johnsonella sp. oral taxon 166*** | Streptococcus pneumoniae |
Lachnospiraceae oral clone MCE9_173*** | Streptococcus sp. oral taxon 071** |
Lactobacillus fermentum | Veillonella parvula |
Porphyromonas endodontalis | Veillonella sp. oral clone VeillA8 |
Lactobacillus sp. | Veillonellaceae bacterium oral taxon 129** |
Lactobacillus sp. NEQAS6172 | Veillonellaceae bacterium oral taxon 132*** |
Olsenella uli (T) | Veillonellaceae bacterium oral taxon 150*** |
| |
without antibiotics
| |
Actinomyces dentalis | Leptotrichia hofstadii F0254 |
Actinomyces sp. oral taxon 525* | Parascardovia denticolens |
Bacteroidetes bacterium oral taxon 274** | Peptostreptococcus sp. oral clone FG014 |
Eubacterium sp. oral clone EH006 | Streptococcus sp. 99 |
Eubacterium sp. oral taxon G32 | Thermomonas hydrothermalis (T) |
Fusobacterium nucleatum | Thermomonas sp. FLA17 |
Gemella morbillorum | TM7 phylum sp. oral taxon 346*** |
Lachnospiraceae bacterium oral taxon 086*** | TM7 phylum sp. oral taxon 349*** |
Lactobacillus rhamnosus | |
| |
common in with and without antibiotics
| |
Atopobium rimae | Parvimonas micra |
Bifidobacterium dentium | Peptostreptococcus stomatis |
Bulleidia moorei | Prevotella sp. oral taxon G57 |
Dialister invisus | Pseudoramibacter alactolyticus |
Eubacterium infirmum | Scardovia sp. oral taxon 195* |
Eubacterium sp. oral clone BU061 | Streptococcus anginosus |
Eubacterium sp. oral strain A35MT | Streptococcus intermedius |
Lactobacillus gasseri | Streptococcus mitis |
Lactobacillus salivarius | Streptococcus mutans |
Mogibacterium timidum |
cultured;
unnamed cultured phylotype;
currently uncultured phylotype