Table 1.
PDB Code |
Purificatino Procedure |
Tagged Protein |
Res. (Å) |
Space Group |
Vps75: Rtt109 |
Other | Interface1 | Ref |
---|---|---|---|---|---|---|---|---|
n/a | 1. Ni-NTA AC 2. Cation EC 3. SEC |
Rtt109 | 4.3 | P21 | 2:1 | Low resolution prevented refinement |
II2,3 | [20] |
3Q66 | 1. GST AC 2. SEC |
Rtt109 | 2.7 | P6122 | 2:1 | Protein buffer had acetyl-CoA; no acetyl-CoA in PDBs |
I, II, III | Su et al. [27] |
3Q68 | 2.7 | P212121 | 2:1 | I, II, III | ||||
3Q33 | 1. Ni-NTA AC 2. Anion EC 3. SEC |
Vps75 | 2.8 | P212121 | 2:2 | Crystal soaked with CoA and an Ac-peptide |
I, II3 | Tang et al. [22] |
3Q35 | 3.3 | - |
See Figure 2.
nterface I not observed as limited resolution prevented building beyond the Rtt109 alone and Vps75 alone molecular replacement search models [20].
Interface III not observed as a truncated Vps75 construct was used [22].
Abbreviations: PDB – Protein Databank, AC - Affinity chromatography, EC - Exchange Chromatography, SEC – Size Exclusion Chromatography, Res. – Resolution, Ref - Reference