Table 6.
PAO1 genes not detected in either I or M series
| Boundary | Size (bp) | Presence in straina: |
Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| I series |
M series |
||||||||||
| I1 | I2 | I3a | I3b | I4 | M1 | M2 | M3a | M3b | |||
| PA0202-PA0207 | 6,568 | Putative enzymes | |||||||||
| Transport of small molecules | |||||||||||
| Membrane protein | |||||||||||
| Transcriptional regulator | |||||||||||
| PA0442 | 116 | Unknown | |||||||||
| PA0445 | 1,016 | Related to phage, transposon, or plasmid | |||||||||
| PA0642 | 788 | Unknown | |||||||||
| PA0715-PA0717 | 3,387 | Related to phage, transposon, or plasmid | |||||||||
| PA0724 | 1,262 | Related to phage, transposon, or plasmid | |||||||||
| PA0820 | 812 | Unknown | |||||||||
| PA0977 | 323 | Unknown | |||||||||
| PA0980-PA0981 | 943 | Unknown | |||||||||
| PA0983-PA0985 | 2,679 | Membrane proteins, secreted factors | |||||||||
| PA0992-PA0993 | 1,388 | Motility and attachment | |||||||||
| Motility and attachment | |||||||||||
| PA1133 | 350 | Unknown | |||||||||
| PA1152 | 344 | Unknown | |||||||||
| PA1204 | 557 | Unknown | |||||||||
| PA1239-PA1241 | 2,463 | Putative enzymes | |||||||||
| Transcriptional regulators | |||||||||||
| PA1368-PA1372 | 7,761 | Unknown | |||||||||
| PA1385 | 1,124 | Cell wall/LPS/capsule | |||||||||
| PA1394 | 254 | Unknown | |||||||||
| PA1509-PA1510 | 2,848 | Unknown | |||||||||
| Unknown | |||||||||||
| PA1887-PA1888 | 2,061 | Unknown | |||||||||
| PA1935-PA1936 | 1,067 | Unknown | |||||||||
| PA1939 | 1,997 | Unknown | |||||||||
| PA2037 | 1,460 | Unknown | |||||||||
| PA2046 | 407 | Unknown | |||||||||
| PA2218-PA2228 | 11,615 | Membrane proteins | |||||||||
| Transcriptional regulator | |||||||||||
| PA2372 | 572 | Unknown | |||||||||
| PA2427 | 467 | Unknown | |||||||||
| PA2456 | 341 | Unknown | |||||||||
| PA2459-PA2462 | 19,322 | Unknown | |||||||||
| PA2730-PA2736 | 10,319 | Putative enzymes | |||||||||
| PA2791 | 290 | Unknown | |||||||||
| PA2818-PA2819 | 2,125 | Unknown | |||||||||
| PA3142_i-PA3160_wzz | 19,498 | Cell wall/LPS/capsule, putative enzymes, amino acid biosynthesis and metabolism, membrane proteins, transport of small molecules | |||||||||
| PA3292 | 857 | Unknown | |||||||||
| PA3298 | 302 | Unknown | |||||||||
| PA3486-PA3488 | 6,856 | Fatty acid and phospholipid metabolism | |||||||||
| PA3497-PA3514 | 16,113 | Putative enzymes | |||||||||
| Transcriptional regulator | |||||||||||
| Membrane proteins | |||||||||||
| Transport of small molecules | |||||||||||
| PA3577_i | 113 | Unknown | |||||||||
| PA3866-PA3869 | 5,339 | Adaptation, protection; secreted factors | |||||||||
| DNA replication, recombination, modification, and repair | |||||||||||
| PA4255_rpmC | 191 | Translation, posttranslational modification, degradation | |||||||||
| PA4306 | 218 | Unknown | |||||||||
| PA4485 | 377 | Unknown | |||||||||
| PA4503 | 1,010 | Membrane proteins, transport of small molecules | |||||||||
| PA4525_pilA | 449 | Motility and attachment | |||||||||
| PA4527_pilC | 1,124 | Motility and attachment | |||||||||
| PA4999 | 1,205 | Unknown | |||||||||
| PA5086-PA5087 | 1,747 | Unknown | |||||||||
| Unknown | |||||||||||
| Total size | 142.4 kb | ||||||||||
a
Shading indicates that the gene is present in the genome.