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. 2011 Dec;55(12):5459–5468. doi: 10.1128/AAC.05178-11

Table 1.

Oligonucleotides used throughout this work

Name and group Orientation Sequence (5′-3′) Purpose
A. lentuluscyp51A deletion
    L-1 Sense CACTGTTTCTCATACAGGGAAACCTCATGG 1st PCR, 5′-end vector construction; 2nd PCR, fusion vector
    LH1 Sense GTTTTCGGATCTGACGTGGTGTATGATTGTTCGTCGACGTTAACTGATATTGAAGGAGCA Hygromycin cassette amplification
    LH2 Antisense TGCTCCTTCAATATCAGTTAACGTCGACGAACAATCATACACCACGTCAGATCCGAAAAC 5′-End vector construction
    HL3 Sense CAGTTAACGTCGACGAATTCGATATCAAGCGACCTCTATCATGATCTGGACAAGGGCTTT Hygromycin cassette amplification
    HL2 Antisense AAAGCCCTTGTCCAGATCATGATAGAGGTCGCTTGATATCGAATTCGTCGACGTTAACTG Hygromycin cassette amplification
    L-2 Antisense CCCTGAGAAGAGCGATGAATAGTCGGTATC 1st PCR, 3′-end vector construction; 2nd PCR, fusion vector
    L-3 Sense TTGTGCCTAGCAAGGAAAAAGACAAGAAA PCR gene deletion verification
A. lentuluscyp51A expression in A. fumigatus
    A Sense TAGAATGAGTGAGCTGATTTGCCATGGATT 1st PCR, 5′-end vector construction; 2nd PCR, fusion vector
    B2 Antisense GTAGGCCGTGAGCAATAGCATCGACACCATTTCGAGGAGACACAGGGAGGGTGAGCCCGA 5′-End vector construction
    C2 Sense TCGGGCTCACCCTCCCTGTGTCTCCTCGAAATGGTGTCGATGCTATTGCTCACGGCCTAC Coding Cyp51A A. lentulus insertion
    D3 Antisense CCTTTGAAGTCCTCGATGGTTACAACAGTCTCACTTGGATGTGTCTTTAGAACGCTTCTC Coding Cyp51A A. lentulus insertion
    E3 Sense GAGAAGCGTTCTAAAGACACATCCAAGTGAGACTGTTGTAACCATCGAGGACTTCAAAGG A. fumigatus terminator insertion
    F3 Antisense TGCTCCTTCAATATCAGTTAACGTCGACGAGCGTGCCAAGGCCAAGGCTTGATTAAGTAT A. fumigatus terminator insertion
    G3 Sense ATACTTAATCAAGCCTTGGCCTTGGCACGCTCGTCGACGTTAACTGATATTGAAGGAGCA Hygromycin resistance cassette
    F4 Antisense CTGTTCAGTCAGGGCATGTCCTTGGAGACTAAGCTTGATATCGAATTCGTCGACGTTAAC Hygromycin resistance cassette
    G4 Sense GTTAACGTCGACGAATTCGATATCAAGCTTAGTCTCCAAGGACATGCCCTGACTGAACAG 3′-End vector construction
    H2 Antisense AGAGATAGAACCTTGGAGTCTGCTTGCCTC 1st PCR, 3′-end vector construction; 2nd PCR, fusion vector
A. lentuluscyp51A expression assessment
    Len-A4 Sense CAGACATGATTTGGAACC cDNA amplification
    Len-Cypa2 Antisense TTAGAACGCTTCTCCCAG cDNA amplification
A. fumigatuscyp51A expression analysis
    A4 Sense CAGACATGATATGGAACC cDNA amplification
    Cypa2 Antisense TTCGACCGCTTCTCCCAG cDNA amplification
    Tub5 Sense TGACCCAGCAGATGTT House-keeping gene used as reference for normalization
    Tub6 Antisense GTTGTTGGGAATCCACTC House-keeping gene used as reference for normalization