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. 2011 Dec;77(24):8523–8531. doi: 10.1128/AEM.05839-11

Table 3.

Correlation between the presence of T. matsutake in Shiro+ soil and of actinobacterial OTUs in both Shiro+ and Shiro+abv soilsa

Site Soil layer OTU code Actinobacterial OTU Family Accession no. Closest GenBank match % Match Significance by Fisher's exact test (2 sided) Phi value
SF Shiro+abv A50 Thermomonosporaceae bacterium 2 Thermomonosporaceae HQ204366 FJ037190 98 (612/626) 0.035 0.425
Shiro+ A9 Leucobacter sp. Microbacteriaceae HQ204336 EF138947 98 (635/645) 0.024 −0.433
A21 Mycobacterium sp. 4 Mycobacteriaceae HQ204341 GU358074 99 (649/653) 0 −0.626
A24 Uncultured actinobacterium 1 HQ204343 EF220614 98 (607/622) 0.025 −0.409
A26 Actinomycetales bacterium 1 HQ204345 X92703 100 (621/623) 0.001 −0.57
A28 Cellulomondaceae bacterium Cellulomonadaceae HQ204347 FJ626810 97 (514/528) 0.043 −0.372
A30 Uncultured actinobacterium 3 HQ204349 FJ570524 99.5 (623/626) 0.079 −0.349
A31 Uncultured actinobacterium 4 HQ204350 FJ570359 99 (607/612) 0.006 −0.507
A32 Uncultured actinobacterium 5 HQ204351 EF220691 99.8 (614/615) 0.004 −0.497
A37 Goodfellowiella sp. Pseudonocardiaceae HQ204356 DQ093349 97 (593/611) 0.007 −0.486
A39 Actinospica sp. 2 Actinospicaceae HQ204358 AJ865862 99 (633/642) 0.089 −0.349
WF Shiro+abv A31 Uncultured actinobacterium 4 HQ204350 FJ570359 99 (607/612) 0.061 0.69
A35 Nocardia sp. Nocardiaceae HQ204354 EF538741 97 (546/565) 0.08 0.633
Shiro+ A25 Streptomyces sp. Streptomycetaceae HQ204344 EU080938 97 (546/565) 0.088 0.607
A29 Thermomonosporaceae bacterium 1 Thermomonosporaceae HQ204348 EF663839 98 (619/632) 0.024 0.81
A30 Uncultured actinobacterium 3 HQ204349 FJ570524 99.5 (623/626) 0.039 −0.624
a

Bold indicates a positive correlation.