Table 3.
Marker | Location | Compared to Utah POP Cases* | Compared to HapMap CEU (n=60)† | Compared to Utah-Matched iControls† | Minor Allele Frequency of Holland Cases | Minor Allele Frequency of Utah POP Cases | |
---|---|---|---|---|---|---|---|
Best P-value | Best P-value | Best P-value | OR | ||||
rs1455311 | 4q21.21 | 0.015 | 0.09§ | 0.198 | 0.72 | 0.14 | 0.34 |
rs1036819 | 8q24.22 | 1.2×10−3 | 0.086§ | 0.126 | 3.15 | 0.081 | 0.31 |
rs430794 | 9q22.2 | 0.892‡ | 0.278 | 0.328 | 0.59 | 0.291 | 0.13 |
rs8027714 | 15q11.2 | 6.4×10−3 | 0.588 | 0.085‡ | 13.57 | 0.061 | 0.26 |
rs1810636 | 20p13 | 0.012 | 0.416 | 0.588 | 1.2 | 0.36 | 0.57 |
rs2236479 | 21q22.3 | 1.4×10−3 | 0.616 | 0.029§ | 0.59 | 0.32 | 0.59 |
POP, pelvic organ prolapse; OR, odds ratio.
Genie was used for this analysis. We used 10,000 simulations for the analysis. Compared to the Utah POP cases, and the best P-value was considered the largest P-value.
Compared to the two control populations, the best P-value was considered the smallest P-value.
Recessive model
Dominant model