Table 2.
Genes over-represented in tumors with severe pathology.
| Gene ID | Total insertions |
Insertions in severe tumors1 |
Sample specific P-value |
|---|---|---|---|
| Uhrf2 | 22 | 14 | 0.002 |
| Kdelc2 | 64 | 49 | 0.004 |
| Fgfr2|Oat | 12 | 7 | 0.007 |
| Frs2 | 28 | 20 | 0.010 |
| Msl2 | 23 | 16 | 0.011 |
| Tmed10 | 18 | 12 | 0.012 |
| Fnbp1l | 40 | 30 | 0.012 |
| Tpm1 | 24 | 17 | 0.014 |
| Atp1a1 | 37 | 28 | 0.020 |
| 6430598A04Rik | 20 | 14 | 0.020 |
| Chn2 | 15 | 10 | 0.021 |
| Grb2 | 26 | 19 | 0.022 |
| Agpat3 | 38 | 29 | 0.023 |
| Tmprss2 | 38 | 29 | 0.023 |
| Chd6 | 39 | 30 | 0.027 |
| C77080 | 11 | 7 | 0.028 |
| Cnot2 | 53 | 42 | 0.033 |
| Brwd1 | 28 | 21 | 0.033 |
| Rtn4rl1 | 28 | 21 | 0.033 |
| Tnrc6c | 23 | 17 | 0.038 |
| Bspry | 18 | 13 | 0.045 |
| CIS12:88752362_30k | 30 | 23 | 0.046 |
| Slk | 30 | 23 | 0.046 |
1
Tumors showing severe atypia, moderate dysplasia or severe dysplasia