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. 2011 Nov 11;12:439. doi: 10.1186/1471-2105-12-439

Table 2.

Corresponding feature identification accuracy v.s. PeptideProphet probability threshold

Testing set of Q1 and Q2 from Group1
PeptideProphet probability No. of peptides tested Accuracy of SCFIA

95% 1425 94.18%

98% 1252 95.13%

99.9% 210 97.62%

99.99% 23 100%