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. 2011 Dec 9;2:236. doi: 10.3389/fmicb.2011.00236

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Copyright © 2011 Hsu, Wu and Talaat.

This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited.

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Comparative analysis of M. ap and M. avium from animals and environmental sources. The gapped consensus sequence of each strain was used for comparison by MAUVE version 2.3.1. (A) A close-up depiction of a breaking point in the alignment of six M. ap genomes in comparison to M. ap K-10 reference genome. The white areas indicated low or zero reads. In this example, the flanking sequences of the breaking point contain high GC percentage sequence but not repetitive sequences. (B) Indels among M. ap and M. avium genomes. Notice genome rearrangements are usually surrounding the genome origin of replication.