Table 1.
Correlations between genomic traits and expression traits
Human |
Mouse |
|||||||
---|---|---|---|---|---|---|---|---|
Expression level | Expression breadth | Expression level | Expression breadth | |||||
Correlationa | P-valueb | Correlationa | P-valueb | Correlationa | P-valueb | Correlationa | P-valueb | |
Exon number | −4.9 | ** | 1.6 | NS | −0.7 | NS | 4.2 | ** |
CDS length | −18.2 | **** | −6.3 | *** | −12.1 | **** | −3.6 | * |
5′-UTR | −3.8 | ** | 0.2 | NS | −2.9 | * | 0.4 | NS |
3′-UTR | −6.3 | *** | 3.5 | ** | 4.2 | ** | 8.6 | *** |
Intron length | −13.4 | **** | −2.1 | * | −7.6 | ** | −2.7 | * |
Exon size | −19.2 | **** | −11.3 | **** | −17.7 | **** | −11.9 | **** |
Intron size | −13.7 | **** | −4.0 | ** | −8.7 | *** | −6.1 | ** |
GC3 | 3.7 | ** | −2.2 | * | 5.5 | ** | 5.0 | ** |
GCi | 5.5 | ** | −1.9 | NS | 4.8 | ** | 6.0 | ** |
GCp | 5.3 | ** | 6.4 | *** | 9.6 | *** | 12.2 | **** |
CAI | 6.8 | *** | −1.0 | NS | 7.6 | ** | 4.2 | ** |
CpGO/E promoter | 11.5 | **** | 18.0 | *, **** | 20.2 | **** | 27.3 | **** |
CpGO/E intron | 14.9 | **** | 7.5 | *** | 5.8 | ** | 4.7 | ** |
dN | −16.3 | **** | −15.8 | **** | −26.1 | **** | −26.1 | **** |
dS | −3.7 | * | −8.8 | *** | −3.5 | * | −5.5 | ** |
dN/dS | −16.7 | **** | −12.7 | **** | −25.5 | **** | −23.9 | **** |
dI | −0.6 | NS | −4.3 | ** | 3.1 | * | 2.8 | NS |
Each variable has been transformed to improve normality. Pearson's correlation coefficients and P-values are shown.
aCorrelation coefficients (×100).bNS, P> 0.05.
*10−3< P≤ 0.05.
**10−8< P≤ 10−3.
***10−15< P≤ 10−8.
****P≤ 10−15.