Table 1. Classification and general features of strain Spyr1 according to the MIGS recommendations [6].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [7] | |
Phylum Actinobacteria | TAS [8] | ||
Class Actinobacteria | TAS [9] | ||
Subclass Actinobacteridae | TAS [9,10] | ||
Order Actinomycetales | TAS [9-12] | ||
Suborder Corynebacterineae | TAS [9,10] | ||
Family Mycobacteriaceae | TAS [9-11,13] | ||
Genus Mycobacterium | TAS [11,14,15] | ||
Species Mycobacterium gilvum | TAS [11,13] | ||
strain Spyr1 | TAS [1] | ||
Gram stain | Weakly positive | TAS [1] | |
Cell shape | irregular rods | TAS [1] | |
Motility | Non motile | TAS [1] | |
Sporulation | nonsporulating | NAS | |
Temperature range | mesophile | TAS [1] | |
Optimum temperature | 30°C | TAS [1] | |
Salinity | normal | TAS [1] | |
MIGS-22 | Oxygen requirement | aerobic | TAS [1] |
Carbon source | Pyrene, fluoranthene, phenanthrene, anthracene, glucose, yeast extract | TAS [1] | |
Energy source | Pyrene, fluoranthene, phenanthrene, anthracene, glucose, yeast extract | TAS [1] | |
MIGS-6 | Habitat | Soil | TAS [1] |
MIGS-15 | Biotic relationship | Free-living | NAS |
MIGS-14 | Pathogenicity | none | NAS |
Biosafety level | 1 | NAS | |
Isolation | Creosote contaminated soil | TAS [1] | |
MIGS-4 | Geographic location | Perivleptos, Epirus, Greece | TAS [1] |
MIGS-5 | Sample collection time | April 2000 | TAS [1] |
MIGS-4.1 | Latitude | 39.789 | NAS |
MIGS-4.2 | Longitude | 20.781 | NAS |
MIGS-4.3 | Depth | 10-20 cm | TAS [1] |
MIGS-4.4 | Altitude | 500 m | TAS [1] |
Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [16].