Table 4. Number of genes associated with the 25 general COG functional categories.
Code | Value | %agea | Description | |
---|---|---|---|---|
J | 130 | 7.12 | Translation | |
K | 53 | 2.9 | Transcription | |
L | 84 | 4.6 | Replication, recombination and repair | |
D | 21 | 1.15 | Cell cycle control, mitosis and meiosis | |
V | 14 | 0.77 | Defense mechanisms | |
T | 79 | 4.33 | Signal transduction mechanisms | |
M | 108 | 5.91 | Cell wall/membrane biogenesis | |
N | 58 | 3.18 | Cell motility | |
U | 52 | 2.85 | Intracellular trafficking and secretion | |
O | 73 | 4 | Posttranslational modification, protein turnover, chaperones | |
C | 116 | 6.35 | Energy production and conversion | |
G | 50 | 2.74 | Carbohydrate transport and metabolism | |
E | 128 | 7.01 | Amino acid transport and metabolism | |
F | 52 | 2.85 | Nucleotide transport and metabolism | |
H | 87 | 4.76 | Coenzyme transport and metabolism | |
I | 34 | 1.86 | Lipid transport and metabolism | |
P | 66 | 3.61 | Inorganic ion transport and metabolism | |
Q | 14 | 0.77 | Secondary metabolites biosynthesis, transport and catabolism | |
R | 153 | 8.38 | General function prediction only | |
S | 89 | 4.87 | Function unknown | |
- | 365 | 19.99 | Not in COGs |
a) The total is based on the total number of protein coding genes in the annotated genome.